Evidence map›Paper›PMID 21715657›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Genome-wide profiling of diel and circadian gene expression in the malaria vector Anopheles gambiae.

Samuel S C Rund, Tim Y Hou, Sarah M Ward, Frank H Collins, Giles E Duffield

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed.

  1. Article
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  13. Seasonal plasticity in daily timing of flight activity inPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  14. Review
  15. Article
  16. Review
  17. Circadian and daily rhythms of disease vector mosquitoes.Current opinion in insect science · 2024
    Review
  18. Article
  19. Article
  20. Review

56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Samuel S C RundDepartment of Biological Sciences and Eck Institute for Global Health, Galvin Life Sciences Center, University of Notre Dame, Notre Dame, IN 46556, USA.
Tim Y Hou
Sarah M Ward
Frank H Collins
Giles E Duffield

Funding

Function of Inhibitor of DNA binding (id) genes in the circadian systemR01GM087508 · NIGMS · UNIVERSITY OF NOTRE DAME · PI DUFFIELD, GILES · 2010 to 2014
$1.4M
NIAID NIH HHS HHSN266200400039CNIGMS NIH HHS R01 GM087508
6 · The paper itself

Abstract

Anopheles gambiae, the primary African vector of malaria parasites, exhibits numerous rhythmic behaviors including flight activity, swarming, mating, host seeking, egg laying, and sugar feeding. However, little work has been performed to elucidate the molecular basis for these daily rhythms. To study how gene expression is regulated globally by diel and circadian mechanisms, we have undertaken a DNA microarray analysis of An. gambiae under light/dark cycle (LD) and constant dark (DD) conditions. Adult mated, non-blood-fed female mosquitoes were collected every 4 h for 48 h, and samples were processed with DNA microarrays. Using a cosine wave-fitting algorithm, we identified 1,293 and 600 rhythmic genes with a period length of 20-28 h in the head and body, respectively, under LD conditions, representing 9.7 and 4.5% of the An. gambiae gene set. A majority of these genes was specific to heads or bodies. Examination of mosquitoes under DD conditions revealed that rhythmic programming of the transcriptome is dependent on an interaction between the endogenous clock and extrinsic regulation by the LD cycle. A subset of genes, including the canonical clock components, was expressed rhythmically under both environmental conditions. A majority of genes had peak expression clustered around the day/night transitions, anticipating dawn and dusk. Genes cover diverse biological processes such as transcription/translation, metabolism, detoxification, olfaction, vision, cuticle regulation, and immunity, and include rate-limiting steps in the pathways. This study highlights the fundamental roles that both the circadian clock and light play in the physiology of this important insect vector and suggests targets for intervention.

Indexed as

Gene Expression ProfilingGene Expression RegulationAnimalsAnophelesCircadian ClocksCircadian RhythmFemaleGenes, InsectGenetic VariationGenome, InsectImmunityInsect VectorsMalariaMembranesMetabolic Networks and PathwaysOlfactory Pathways

Identifiers

PMID21715657
PMCPMC3156198

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.