Evidence map›Paper›PMID 21715484›Full record

ArticleJournal of virology2011

Replication-competent simian immunodeficiency virus (SIV) Gag escape mutations archived in latent reservoirs during antiretroviral treatment of SIV-infected macaques.

Suzanne E Queen, Brian M Mears, Kathleen M Kelly, Jamie L Dorsey, Zhaohao Liao, Jason B Dinoso, Lucio Gama, Robert J Adams, M Christine Zink, Janice E Clements and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. A Switch from Glial to Neuronal Gene Expression Alterations in the Spinal Cord of SIV-infected Macaques on Antiretroviral Therapy.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. HIV-1CViruses · 2020
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Is the central nervous system a reservoir of HIV-1?Current opinion in HIV and AIDS · 2014
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Suzanne E QueenDepartment of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205-2196, USA.
Brian M Mears
Kathleen M Kelly
Jamie L Dorsey
Zhaohao Liao
Jason B Dinoso
Lucio Gama
Robert J Adams
M Christine Zink
Janice E Clements
Stephen J Kent
Joseph L Mankowski
Johns Hopkins University · USJohns Hopkins Medicine · USUniversity of Melbourne · AU

Funding

Project 4: Intracellular mechanism of virus persistence in astrocytes/macrophagesP01MH070306 · NIMH · JOHNS HOPKINS UNIVERSITY · PI CLEMENTS, JANICE E · 2004 to 2015
$16.0M
Development of an SPF Macaca nemestrina Breeding ColonyP40OD013117 · OD · JOHNS HOPKINS UNIVERSITY · PI ADAMS, ROBERT J. · 2012 to 2016
$4.9M
DEVELOPMENT OF AN SPF MACACA NEMESTRINA BREEDING COLONYP40RR019995 · NCRR · JOHNS HOPKINS UNIVERSITY · PI ADAMS, ROBERT J. · 2006 to 2011
$4.9M
Training Veterinarians for Careers in Biomedical ResearchT32RR007002 · NCRR · JOHNS HOPKINS UNIVERSITY · PI ZINK, M CHRISTINE · 1985 to 2011
$4.4M
NCRR NIH HHS P40 RR019995NCRR NIH HHS RR007002NCRR NIH HHS RR019995NCRR NIH HHS T32 RR007002NIH HHS P40 OD013117NIMH NIH HHS MH070306NIMH NIH HHS P01 MH070306
6 · The paper itself

Abstract

In response to pressure exerted by major histocompatibility complex (MHC) class I-mediated CD8(+) T cell control, human immunodeficiency virus (HIV) escape mutations often arise in immunodominant epitopes recognized by MHC class I alleles. While the current standard of care for HIV-infected patients is treatment with highly active antiretroviral therapy (HAART), suppression of viral replication in these patients is not absolute and latently infected cells persist as lifelong reservoirs. To determine whether HIV escape from MHC class I-restricted CD8(+) T cell control develops during HAART treatment and then enters latent reservoirs in the periphery and central nervous system (CNS), with the potential to emerge as replication-competent virus, we tracked the longitudinal development of the simian immunodeficiency virus (SIV) Gag escape mutation K165R in HAART-treated SIV-infected pigtailed macaques. Key findings of these studies included: (i) SIV Gag K165R escape mutations emerged in both plasma and cerebrospinal fluid (CSF) during the decaying phase of viremia after HAART initiation before suppression of viral replication, (ii) SIV K165R Gag escape mutations were archived in latent proviral DNA reservoirs, including the brain in animals receiving HAART that suppressed viral replication, and (iii) replication-competent SIV Gag K165R escape mutations were present in the resting CD4(+) T cell reservoir in HAART-treated SIV-infected macaques. Despite early administration of aggressive antiretroviral treatment, HIV immune escape from CD8(+) T cell control can still develop during the decaying phases of viremia and then persist in latent reservoirs, including the brain, with the potential to emerge if HAART therapy is interrupted.

Indexed as

Mutation, MissenseAmino Acid SubstitutionAnimalsAnti-Retroviral AgentsCD8-Positive T-LymphocytesGene Products, gagHistocompatibility Antigens Class IImmunodominant EpitopesMacacaSelection, GeneticSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusAnti-Retroviral AgentsGene Products, gagHistocompatibility Antigens Class IImmunodominant Epitopes

Identifiers

PMID21715484
PMCPMC3165835
OpenAlexW2135609535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.