Evidence map›Paper›PMID 21712190›Full record

ArticleHuman genomics2011

Update on the aldehyde dehydrogenase gene (ALDH) superfamily.

Brian Jackson, Chad Brocker, David C Thompson, William Black, Konstandinos Vasiliou, Daniel W Nebert, Vasilis Vasiliou

Open access · goldAbstract read
In one paragraph

Article in Human genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 186 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
186citing papers in PubMed, 3 pooled it
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

186 citing papers in PubMed, 3 syntheses or guidelines pooled it, 354 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
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  13. Synergistic toxicity in alcohol-associated liver disease and PFAS exposure.Toxicological sciences : an official journal of the Society of Toxicology · 2025
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  19. Journal of fungi (Basel, Switzerland) · 2025
    Article
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126 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Brian JacksonMolecular Toxicology and Environmental Health Sciences Program, Department of Pharmaceutical Sciences, University of Colorado Anschutz Medical Center, Aurora, USA.
Chad Brocker
David C Thompson
William Black
Konstandinos Vasiliou
Daniel W Nebert
Vasilis Vasiliou
University of Colorado Anschutz Medical Campus · USUniversity of Cincinnati · US

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
Novel Role of Corneal Crystallins as Modulators of Cell Growth and TransparencyR01EY017963 · NEI · YALE UNIVERSITY · PI VASILIOU, VASILIS · 2007 to 2019
$3.7M
Role of Mitochondrial Aldehyde Dehydrogenases in Ethanol Metabolism and ToxicityR21AA017754 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI VASILIOU, VASILIS · 2009 to 2010
$411k
Role of ALDH7A1 in Ethanol-Induced Oxidative DamageF31AA018248 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI BROCKER, CHAD NICHOLAS · 2010 to 2011
$52k
Enzymology and Molecular Biology of Carbonyl Metabolism XVR13AA019612 · NIAAA · PURDUE UNIVERSITY · PI WEINER, HENRY · 2010 to 2010
$31k
NEI NIH HHS R01 EY017963NEI NIH HHS R01EY17963NIAAA NIH HHS F31 AA018248NIAAA NIH HHS F31AA018248NIAAA NIH HHS R13-AA019612NIAAA NIH HHS R21 AA017754NIAAA NIH HHS R21AA017754NIEHS NIH HHS P30 ES06096
6 · The paper itself

Abstract

Members of the aldehyde dehydrogenase gene (ALDH) superfamily play an important role in the enzymic detoxification of endogenous and exogenous aldehydes and in the formation of molecules that are important in cellular processes, like retinoic acid, betaine and gamma-aminobutyric acid. ALDHs exhibit additional, non-enzymic functions, including the capacity to bind to some hormones and other small molecules and to diminish the effects of ultraviolet irradiation in the cornea. Mutations in ALDH genes leading to defective aldehyde metabolism are the molecular basis of several diseases, including gamma-hydroxybutyric aciduria, pyridoxine-dependent seizures, Sjögren-Larsson syndrome and type II hyperprolinaemia. Interestingly, several ALDH enzymes appear to be markers for normal and cancer stem cells. The superfamily is evolutionarily ancient and is represented within Archaea, Eubacteria and Eukarya taxa. Recent improvements in DNA and protein sequencing have led to the identification of many new ALDH family members. To date, the human genome contains 19 known ALDH genes, as well as many pseudogenes. Whole-genome sequencing allows for comparison of the entire complement of ALDH family members among organisms. This paper provides an update of ALDH genes in several recently sequenced vertebrates and aims to clarify the associated records found in the National Center for Biotechnology Information (NCBI) gene database. It also highlights where and when likely gene-duplication and gene-loss events have occurred. This information should be useful to future studies that might wish to compare the role of ALDH members among species and how the gene superfamily as a whole has changed throughout evolution.

Indexed as

Aldehyde DehydrogenaseAnimalsComputational BiologyEvolution, MolecularHumansMultigene FamilyPhylogenySequence Analysis, DNAAldehyde Dehydrogenase

Identifiers

PMID21712190
PMCPMC3392178
OpenAlexW2155091769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.