Evidence map›Paper›PMID 21711518›Full record

ArticleBehavioral and brain functions : BBF2011

Risk and protective genetic variants in suicidal behaviour: association with SLC1A2, SLC1A3, 5-HTR1B &NTRK2 polymorphisms.

Therese M Murphy, Maria Ryan, Tom Foster, Chris Kelly, Roy McClelland, John O'Grady, Eleanor Corcoran, John Brady, Michael Reilly, Anne Jeffers and 12 more

Open access · goldAbstract read
In one paragraph

Article in Behavioral and brain functions : BBF, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

  1. Pooled it
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  16. Effect of CRHR1 and CRHR2 gene polymorphisms and childhood trauma in suicide attempt.Journal of neural transmission (Vienna, Austria : 1996) · 2019
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Therese M MurphyDepartment of Psychiatry & Mental Health Research, St. Vincent's University Hospital, University College Dublin, Elm Park, Dublin 4, Ireland. murphyth@tcd.ie
Maria Ryan
Tom Foster
Chris Kelly
Roy McClelland
John O'Grady
Eleanor Corcoran
John Brady
Michael Reilly
Anne Jeffers
Katherine Brown
Anne Maher
Noreen Bannan
Alison Casement
Dermot Lynch
Sharon Bolger
Prerna Tewari
Avril Buckley
Leah Quinlivan
Leslie Daly
Cecily Kelleher
Kevin M Malone
University College Dublin · IEQueens University · BDLetterkenny University Hospital · IEMidland Regional Hospital Portlaoise · IEConnolly Hospital Blanchardstown · IESt. James's Hospital · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSuicidal behaviour is known to aggregate in families. Patients with psychiatric disorders are at higher risk for suicide attempts (SA), however protective and risk genetic variants for suicide appear to be independent of underlying psychiatric disorders. Here we investigate genetic variants in genes important for neurobiological pathways linked to suicidal behaviour and/or associated endophenotypes, for association with SA among patients with co-existing psychiatric illness. Selected gene-gene and gene-environment interactions were also tested.

methodsDNA was obtained from bloods of 159 patients (76 suicide attempters and 83 non-attempters), who were profiled for DSM-IV Axis I psychiatric diagnosis. Twenty-eight single nucleotide polymorphisms (SNPs) from 18 candidate genes (COMT, 5-HT2A, 5-HT1A, 5-HTR1B, TPH1, MAO-A, TPH2, DBH, CNR1, BDNF, ABCG1, GABRA5, GABRG2, GABRB2, SLC1A2, SLC1A3, NTRK2, CRHR1) were genotyped. Genotyping was performed by KBioscience. Tests of association between genetic variants and SA were conducted using Chi squared and Armitage Trend tests. Binary logistical regression analyses were performed to evaluate the contribution of individual genetic variants to the prediction of SA, and to examine SNPs for potential gene-gene and gene-environment interactions.

resultsOur analysis identified 4 SNPs (rs4755404, rs2269272, rs6296 and rs1659400), which showed evidence of association with SA compared to a non-attempter control group. We provide evidence of a 3-locus gene-gene interaction, and a putative gene-environment interaction, whereby genetic variation at the NTRK2 locus may moderate the risk associated with history of childhood abuse.

conclusionPreliminary findings suggest that allelic variability in SLC1A2/3, 5-HTR1B and NTRK2 may be relevant to the underlying diathesis for suicidal acts.

Indexed as

AdultEndophenotypesExcitatory Amino Acid Transporter 1Excitatory Amino Acid Transporter 2FemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeGlutamate Plasma Membrane Transport ProteinsHumansMaleMental DisordersNeurotransmitter AgentsPolymorphism, Single NucleotideReceptor, Serotonin, 5-HT1BReceptor, trkBExcitatory Amino Acid Transporter 1Excitatory Amino Acid Transporter 2Glutamate Plasma Membrane Transport ProteinsNeurotransmitter AgentsReceptor, Serotonin, 5-HT1BReceptor, trkBSLC1A2 protein, humanSLC1A3 protein, human

Identifiers

PMID21711518
PMCPMC3141406
OpenAlexW2123881866

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.