Evidence map›Paper›PMID 21708167›Full record

ArticleJournal of insect physiology2011

Transcript profiling of the meiotic drive phenotype in testis of Aedes aegypti using suppressive subtractive hybridization.

Dongyoung Shin, Lizhong Jin, Neil F Lobo, David W Severson

Abstract read
In one paragraph

Article in Journal of insect physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Sex chromosome drive.Cold Spring Harbor perspectives in biology · 2014
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dongyoung ShinEck Institute for Global Health, Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556-5645, USA. dshin@nd.edu
Lizhong Jin
Neil F Lobo
David W Severson
University of Notre Dame · US

Funding

NOVEL APPROACHES FOR MALARIA CONTROLP01AI045123 · NIAID · UNIVERSITY OF NOTRE DAME · PI COLLINS, FRANK H. · 1999 to 2003
$2.7M
RFLP MAPPING OF PLASMODIUM REFRACTORY GENES IN MOSQUITOSR01AI033127 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI SEVERSON, DAVID W · 1992 to 2004
$1.5M
NIAID NIH HHS P01 AI045123NIAID NIH HHS P01-AI45123NIAID NIH HHS R01 AI033127NIAID NIH HHS R01-AI33127
6 · The paper itself

Abstract

The meiotic drive gene in Aedes aegypti is tightly linked with the sex determination locus on chromosome 1, and causes highly male-biased sex ratios. We prepared cDNA libraries from testes from the Ae. aegypti T37 strain (driving) and RED strain (non-driving), and used suppressive subtraction hybridization techniques to enrich for T37 testes-specific transcripts. Expressed sequence tags (ESTs) were obtained from a total of 2784 randomly selected clones from the subtracted T37 (subT37) library as well as the primary libraries for each strain (pT37 and pRED). Sequence analysis identified a total of 171 unique genes in the subT37 library and 299 unique genes among the three libraries. The majority of genes enriched in the subT37 library were associated with signal transduction, development, reproduction, metabolic process and cell cycle functions. Further, as observed with meiotic drive systems in Drosophila and mouse, a number of these genes were associated with signaling cascades that involve the Ras superfamily of regulatory small GTPases. Differential expression of several of these genes was verified in Ae. aegypti pupal testes using qRT-PCR. This study increases our understanding of testes gene expression enriched in adult males from the meiotic drive strain as well as insights into the basic testes transcriptome in Ae. aegypti.

Indexed as

AedesAnimalsExpressed Sequence TagsFemaleGene Expression ProfilingGene LibraryMaleMeiosisNucleic Acid HybridizationPhenotypeReverse Transcriptase Polymerase Chain ReactionSequence Analysis, DNASex Determination ProcessesSex RatioTestis

Identifiers

PMID21708167
PMCPMC3167017
OpenAlexW2087334776

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.