ArticlePlant physiology2011
B73-Mo17 near-isogenic lines demonstrate dispersed structural variation in maize.
Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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44 citing papers in PubMed, 98 citations in OpenAlex.
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- Pan-genome analysis reveals structural variation- associated expression and evolutionary diversity of theFrontiers in plant science · 2026Article
- Transcription factor binding divergence drives transcriptional and phenotypic variation in maize.Nature plants · 2025Article
- Transcription factor binding site divergence across maize inbred lines drives transcriptional and phenotypic variation.bioRxiv : the preprint server for biology · 2024Article
- A complete telomere-to-telomere assembly of the maize genome.Nature genetics · 2023Article
- Gossypium mustelinum genome and an introgression population enrich interspecific genetics and breeding in cotton.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Accurate prediction of quantitative traits with failed SNP calls in canola and maize.Frontiers in plant science · 2023Article
- Analyses of open-access multi-omics data sets reveal genetic and expression characteristics of maizeAoB PLANTS · 2021Article
- Whole-genome variation of transposable element insertions in a maize diversity panel.G3 (Bethesda, Md.) · 2021Article
- Megabase-scale presence-absence variation with Tripsacum origin was under selection during maize domestication and adaptation.Genome biology · 2021Article
- Gene regulatory effects of a large chromosomal inversion in highland maize.PLoS genetics · 2020Article
- Characterizing introgression-by-environment interactions using maize near isogenic lines.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Variation in Maize Chlorophyll Biosynthesis Alters Plant Architecture.Plant physiology · 2020Article
- Interaction Between Induced and Natural Variation atG3 (Bethesda, Md.) · 2020Article
- Single primer enrichment technology as a tool for massive genotyping: a benchmark on black poplar and maize.Annals of botany · 2019Article
- AG3 (Bethesda, Md.) · 2019Article
- Genome-wide identification of quantitative trait loci for important plant and flower traits in petunia using a high-density linkage map and an interspecific recombinant inbred population derived fromHorticulture research · 2019Article
- Discovery of Anthocyanin Acyltransferase1 (AAT1) in Maize Using Genotyping-by-Sequencing (GBS).G3 (Bethesda, Md.) · 2018Article
- Comparative transcriptome analysis reveals that tricarboxylic acid cycle-related genes are associated with maize CMS-C fertility restoration.BMC plant biology · 2018Article
- Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes.Nature genetics · 2018Article
Corrections and comments
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Authors and funding
10 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Recombinant inbred lines developed from the maize (Zea mays ssp. mays) inbreds B73 and Mo17 have been widely used to discover quantitative trait loci controlling a wide variety of phenotypic traits and as a resource to produce high-resolution genetic maps. These two parents were used to produce a set of near-isogenic lines (NILs) with small regions of introgression into both backgrounds. A novel array-based genotyping platform was used to score genotypes of over 7,000 loci in 100 NILs with B73 as the recurrent parent and 50 NILs with Mo17 as the recurrent parent. This population contains introgressions that cover the majority of the maize genome. The set of NILs displayed an excess of residual heterozygosity relative to the amount expected based on their pedigrees, and this excess residual heterozygosity is enriched in the low-recombination regions near the centromeres. The genotyping platform provided the ability to survey copy number variants that exist in more copies in Mo17 than in B73. The majority of these Mo17-specific duplications are located in unlinked positions throughout the genome. The utility of this population for the discovery and validation of quantitative trait loci was assessed through analysis of plant height variation.
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