Evidence map›Paper›PMID 21705601›Full record

ArticleJournal of bacteriology2011

Complete genome sequence of the Crohn's disease-associated adherent-invasive Escherichia coli strain HM605.

David J Clarke, Roy R Chaudhuri, Helen M Martin, Barry J Campbell, Jonathan M Rhodes, Chrystala Constantinidou, Mark J Pallen, Nicholas J Loman, Adam F Cunningham, Douglas F Browning and 1 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Journal of bacteriology · 2026
    Review
  3. Whole-genome analysis of fiveMicrobiology spectrum · 2025
    Article
  4. Review
  5. Review
  6. Characterization of Adherent-InvasiveInternational journal of molecular sciences · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Antimicrobial Resistance Profiles of Adherent InvasiveAntibiotics (Basel, Switzerland) · 2020
    Article
  12. Article
  13. Why the discovery of adherent-invasiveWorld journal of biological chemistry · 2020
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Genetic Diversity and Virulence Determinants ofFrontiers in microbiology · 2017
    Article
  20. Gastroenterology and hepatology from bed to bench · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

David J ClarkeDepartment of Microbiology and Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland.
Roy R Chaudhuri
Helen M Martin
Barry J Campbell
Jonathan M Rhodes
Chrystala Constantinidou
Mark J Pallen
Nicholas J Loman
Adam F Cunningham
Douglas F Browning
Ian R Henderson

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research Council G0900857
6 · The paper itself

Abstract

Adherent-invasive Escherichia coli strains are increasingly being associated with intestinal pathologies. Here we present the genome sequence of E. coli HM605, a strain isolated from colonic biopsy specimens of a patient with Crohn's disease.

Indexed as

Bacterial AdhesionGenome, BacterialChromosomes, BacterialColonCrohn DiseaseEpithelial CellsEscherichia coliHumansIntestinal MucosaMolecular Sequence DataPlasmids

Identifiers

PMID21705601
PMCPMC3165516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.