Evidence map›Paper›PMID 21703329›Full record

ArticleBiochimie2011

In vivo and in vitro function of human UDP-galactose 4'-epimerase variants.

Thomas J McCorvie, Jamie Wasilenko, Ying Liu, Judith L Fridovich-Keil, David J Timson

Open access · hybridAbstract read
In one paragraph

Article in Biochimie, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Galactosemia: Towards Pharmacological Chaperones.Journal of personalized medicine · 2021
    Review
  5. Metabolic precision labeling enables selective probing of O-linkedProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Article
  7. Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Thomas J McCorvieSchool of Biological Sciences, Queen's University Belfast, Medical Biology Centre, 97 Lisburn Road, Belfast BT9 7BL, UK.
Jamie Wasilenko
Ying Liu
Judith L Fridovich-Keil
David J Timson
Emory University · USQueen's University Belfast · GB

Funding

Studies of Galactose Toxicity in Yeast and Human CellsR01DK059904 · NIDDK · EMORY UNIVERSITY · PI FRIDOVICH-KEIL, JUDITH L. · 2002 to 2011
$3.2M
HUMAN ENZYMES UNDERLYING GALACTOSEMIAR01DK046403 · NIDDK · EMORY UNIVERSITY · PI FRIDOVICH-KEIL, JUDITH L. · 1998 to 2011
$3.0M
MOLECULAR ANALYSIS OF HUMAN GAL-1-P URIDYLTRANSFERASER29DK046403 · NIDDK · EMORY UNIVERSITY · PI FRIDOVICH-KEIL, JUDITH L. · 1993 to 1997
–
NIDDK NIH HHS DK046403NIDDK NIH HHS DK059904NIDDK NIH HHS R01 DK046403NIDDK NIH HHS R01 DK059904Wellcome Trust
6 · The paper itself

Abstract

Type III galactosemia results from reduced activity of the enzyme UDP-galactose 4'-epimerase. Five disease-associated alleles (G90E, V94M, D103G, N34S and L183P) and three artificial alleles (Y105C, N268D, and M284K) were tested for their ability to alleviate galactose-induced growth arrest in a Saccharomyces cerevisiae strain which lacks endogenous UDP-galactose 4'-epimerase. For all of these alleles, except M284K, the ability to alleviate galactose sensitivity was correlated with the UDP-galactose 4'-epimerase activity detected in cell extracts. The M284K allele, however, was able to substantially alleviate galactose sensitivity, but demonstrated near-zero activity in cell extracts. Recombinant expression of the corresponding protein in Escherichia coli resulted in a protein with reduced enzymatic activity and reduced stability towards denaturants in vitro. This lack of stability may result from the introduction of an unpaired positive charge into a bundle of three α-helices near the surface of the protein. The disparities between the in vivo and in vitro data for M284K-hGALE further suggest that there are additional, stabilising factors present in the cell. Taken together, these results reinforce the need for care in the interpretation of in vitro, enzymatic diagnostic tests for type III galactosemia.

Indexed as

AllelesBlotting, WesternEnzyme StabilityGalactosemiasHumansSaccharomyces cerevisiaeUDPglucose 4-EpimeraseUDPglucose 4-Epimerase

Identifiers

PMID21703329
PMCPMC3168732
OpenAlexW2051955172

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.