Evidence map›Paper›PMID 21701584›Full record

ArticlePloS one2011

Isolation by elevation: genetic structure at neutral and putatively non-neutral loci in a dominant tree of subtropical forests, Castanopsis eyrei.

Miao-Miao Shi, Stefan G Michalski, Xiao-Yong Chen, Walter Durka

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Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

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20citing papers in PubMed
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3 · Its place in the literature

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20 citing papers in PubMed.

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  5. A chromosome-scale genome assembly ofFrontiers in plant science · 2023
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5 · Who and what money

Authors and funding

4 authors.

Miao-Miao ShiHelmholtz Centre for Environmental Research - UFZ, Department of Community Ecology (BZF), Halle, Germany. miaomiao.shi@ufz.de
Stefan G Michalski
Xiao-Yong Chen
Walter Durka

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe distribution of genetic diversity among plant populations growing along elevational gradients can be affected by neutral as well as selective processes. Molecular markers used to study these patterns usually target neutral processes only, but may also be affected by selection. In this study, the effects of elevation and successional stage on genetic diversity of a dominant tree species were investigated controlling for neutrality of the microsatellite loci used. METHODOLOGY/PRINCIPAL

findingsDiversity and differentiation among 24 populations of Castanopsis eyrei from different elevations (251-920 m) and successional stages were analysed by eight microsatellite loci. We found that one of the loci (Ccu97H18) strongly deviated from a neutral model of differentiation among populations due to either divergent selection or hitchhiking with an unknown selected locus. The analysis showed that C. eyrei populations had a high level of genetic diversity within populations (A(R) = 7.6, H(E) = 0.82). Genetic variation increased with elevation for both the putatively selected locus Ccu97H18 and the neutral loci. At locus Ccu97H18 one allele was dominant at low elevations, which was replaced at higher elevations by an increasing number of other alleles. The level of genetic differentiation at neutral loci was similar to that of other Fagaceae species (F(ST) = 0.032,  = 0.15). Population differentiation followed a model of isolation by distance but additionally, strongly significant isolation by elevation was found, both for neutral loci and the putatively selected locus. CONCLUSIONS/SIGNIFICANCE: The results indicate higher gene flow among similar elevational levels than across different elevational levels and suggest a selective influence of elevation on the distribution of genetic diversity in C. eyrei. The study underlines the importance to check the selective neutrality of marker loci in analyses of population structure.

Indexed as

TreesFagaceaeGene FlowGenetic VariationMicrosatellite Repeats

Identifiers

PMID21701584
PMCPMC3118804

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.