Evidence map›Paper›PMID 21697395›Full record

ArticleMolecular cancer therapeutics2011

Discovery of a small molecule targeting IRA2 deletion in budding yeast and neurofibromin loss in malignant peripheral nerve sheath tumor cells.

Matthew Wood, Melissa Rawe, Gunnar Johansson, Shu Pang, Ryan S Soderquist, Ami V Patel, Sandra Nelson, William Seibel, Nancy Ratner, Yolanda Sanchez

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cancer therapeutics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Matthew WoodDepartment of Pharmacology and Toxicology, Norris Cotton Cancer Center, Dartmouth Medical School, 7650 Remsen, Hanover, NH 03755, USA.
Melissa Rawe
Gunnar Johansson
Shu Pang
Ryan S Soderquist
Ami V Patel
Sandra Nelson
William Seibel
Nancy Ratner
Yolanda Sanchez
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
Cancer Biology and Molecular TherapeuticsT32CA009658 · NCI · DARTMOUTH COLLEGE · PI EASTMAN, ALAN R · 1991 to 2011
$3.8M
Identification of Drug Targets for NF1R21NS060940 · NINDS · DARTMOUTH COLLEGE · PI SANCHEZ, YOLANDA · 2009 to 2010
$388k
NCI NIH HHS P30 CA023108NCI NIH HHS T32 CA009658NCI NIH HHS T32-CA009658-18NINDS NIH HHS R21 NS060940NINDS NIH HHS R21NS060940
6 · The paper itself

Abstract

Malignant peripheral nerve sheath tumor (MPNST) is a life-threatening complication of neurofibromatosis type 1 (NF1). NF1 is caused by mutation in the gene encoding neurofibromin, a negative regulator of Ras signaling. There are no effective pharmacologic therapies for MPNST. To identify new therapeutic approaches targeting this dangerous malignancy, we developed assays in NF1(+/+) and NF1(-/-) MPNST cell lines and in budding yeast lacking the NF1 homologue IRA2 (ira2Δ). Here, we describe UC1, a small molecule that targets NF1(-/-) cell lines and ira2Δ budding yeast. By using yeast genetics, we identified NAB3 as a high-copy suppressor of UC1 sensitivity. NAB3 encodes an RNA binding protein that associates with the C-terminal domain of RNA Pol II and plays a role in the termination of nonpolyadenylated RNA transcripts. Strains with deletion of IRA2 are sensitive to genetic inactivation of NAB3, suggesting an interaction between Ras signaling and Nab3-dependent transcript termination. This work identifies a lead compound and a possible target pathway for NF1-associated MPNST, and shows a novel model system approach to identify and validate target pathways for cancer cells in which NF1 loss drives tumor formation.

Indexed as

Antineoplastic AgentsCell LineDrug DiscoveryEpistasis, GeneticGene DeletionGene Expression Regulation, FungalGene Expression Regulation, NeoplasticGTPase-Activating ProteinsHigh-Throughput Screening AssaysHumansNerve Sheath NeoplasmsNeurofibromin 1Nuclear ProteinsProtein KinasesPyrazolesRNA-Binding Proteins(3-(3-bromophenyl)-1-phenylpyrazol-4-yl)methyl carbamimidothioateAntineoplastic AgentsCTDK-I protein complex, S cerevisiaeGTPase-Activating ProteinsIRA2 protein, S cerevisiaeNAB3 protein, S cerevisiaeNeurofibromin 1Nuclear ProteinsProtein KinasesPyrazolesRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSmall Molecule LibrariesThiourea

Identifiers

PMID21697395
PMCPMC3170489
OpenAlexW2145521600

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.