Evidence map›Paper›PMID 21695221›Full record

ArticlePloS one2011

The retrograde IFT machinery of C. elegans cilia: two IFT dynein complexes?

Limin Hao, Evgeni Efimenko, Peter Swoboda, Jonathan M Scholey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. IFT-Cargo Interactions and Protein Transport in Cilia.Trends in biochemical sciences · 2015
    Review
  13. Dynein and intraflagellar transport.Experimental cell research · 2015
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Protein sorting, targeting and trafficking in photoreceptor cells.Progress in retinal and eye research · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Limin HaoDepartment of Molecular and Cell Biology, University of California Davis, Davis, California, United States of America.
Evgeni Efimenko
Peter Swoboda
Jonathan M Scholey
Karolinska Institutet · SEUniversity of California, Davis · US

Funding

NOVEL KINESIN RELATED MOTOR PROTEINR01GM050718 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SCHOLEY, JONATHAN M. · 1994 to 2010
$2.8M
NIGMS NIH HHS GM50718NIGMS NIH HHS R01 GM050718
6 · The paper itself

Abstract

We analyzed the relatively poorly understood IFT-dynein (class DYNC2)-driven retrograde IFT pathway in C. elegans cilia, which yielded results that are surprising in the context of current models of IFT. Assays of C. elegans dynein gene expression and intraflagellar transport (IFT) suggest that conventional IFT-dynein contains essential heavy (CHE-3), light-intermediate (XBX-1), plus three light polypeptide chains that participate in IFT, but no "essential" intermediate chain. IFT assays of XBX-1::YFP suggest that IFT-dynein is transported as cargo to the distal tip of the cilium by kinesin-2 motors, but independent of the IFT-particle/BBSome complexes. Finally, we were surprised to find that the subset of cilia present on the OLQ (outer labial quadrant) neurons assemble independently of conventional "CHE-3" IFT-dynein, implying that there is a second IFT-dynein acting in these cilia. We have found a novel gene encoding a dynein heavy chain, DHC-3, and two light chains, in OLQ neurons, which could constitute an IFT-dynein complex in OLQ neuronal cilia. Our results underscore several surprising features of retrograde IFT that require clarification.

Indexed as

AnimalsBase SequenceCaenorhabditis elegansCaenorhabditis elegans ProteinsCiliaDyneinsFlagellaGenomicsProtein SubunitsSensory Receptor CellsCaenorhabditis elegans ProteinsDyneinsProtein Subunits

Identifiers

PMID21695221
PMCPMC3112216
OpenAlexW2123209972

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.