Evidence map›Paper›PMID 21695151›Full record

ArticlePloS one2011

HuB (elavl2) mRNA is restricted to the germ cells by post-transcriptional mechanisms including stabilisation of the message by DAZL.

Sophie E Wiszniak, B Kate Dredge, Kirk B Jensen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Sex Lethal Gene Manipulates Gonadal Development of Medaka,International journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Brf1 posttranscriptionally regulates pluripotency and differentiation responses downstream of Erk MAP kinase.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  10. Article
  11. Kinked β-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  12. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sophie E WiszniakDiscipline of Biochemistry, School of Molecular and Biomedical Science, University of Adelaide, Adelaide, Australia.
B Kate Dredge
Kirk B Jensen
University of Adelaide · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability of germ cells to carry out a gene regulatory program distinct from the surrounding somatic tissue, and their capacity to specify an entire new organism has made them a focus of many studies that seek to understand how specific regulatory mechanisms, particularly post-transcriptional mechanisms, contribute to cell fate. In zebrafish, germ cells are specified through the inheritance of cytoplasmic determinants, termed the germ plasm, which contains a number of maternal mRNAs and proteins. Investigation of several of these messages has revealed that the restricted localisation of these mRNAs to the germ plasm and subsequent germ cells is due to cis-acting sequence elements present in their 3'UTRs. Here we show that a member of the Hu family of RNA-binding proteins, HuB, is maternally provided in the zebrafish embryo and exhibits germ cell specific expression during embryogenesis. Restriction of HuB mRNA to the germ cells is dependent on a number of sequence elements in its 3'UTR, which act to degrade the mRNA in the soma and stabilise it in the germ cells. In addition, we show that the germ cell specific RNA-binding protein DAZL is able to promote HuB mRNA stability and translation in germ cells, and further demonstrate that these activities require a 30 nucleotide element in the 3'UTR. Our study suggests that DAZL specifically binds the HuB 3'UTR and protects the message from degradation and/or enhances HuB translation, leading to the germ cell specific expression of HuB protein.

Indexed as

Transcription, Genetic3' Untranslated RegionsAnimalsELAV ProteinsEmbryonic DevelopmentFemaleGene Expression Regulation, DevelopmentalGerm CellsMaleOrgan SpecificityRegulatory Sequences, Nucleic AcidRNA-Binding ProteinsRNA, MessengerRNA StabilityTime FactorsZebrafish3' Untranslated RegionsDAZL protein, zebrafishELAV ProteinsHuB protein, zebrafishRNA-Binding ProteinsRNA, MessengerZebrafish Proteins

Identifiers

PMID21695151
PMCPMC3113899
OpenAlexW1967312115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.