Evidence map›Paper›PMID 21691255›Full record

ArticlePharmacogenetics and genomics2011

Functional analysis of nonsynonymous single nucleotide polymorphisms of multidrug resistance-associated protein 2 (ABCC2).

Vandana Megaraj, Tianyong Zhao, Christian M Paumi, Phillip M Gerk, Richard B Kim, Mary Vore

Open access · greenAbstract read
In one paragraph

Article in Pharmacogenetics and genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 34 citations in OpenAlex.

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  9. In vitro Transport Ability ofOncoTargets and therapy · 2020
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  12. Clinical Perspectives on Targeting Therapies for Personalized Medicine.Advances in protein chemistry and structural biology · 2016
    Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Vandana MegarajGraduate Center for Toxicology, University of Kentucky, Lexington, Kentucky 40536-0305, USA.
Tianyong Zhao
Christian M Paumi
Phillip M Gerk
Richard B Kim
Mary Vore
The Graduate Center, CUNY · USUniversity of Kentucky · USVirginia Commonwealth University · US

Funding

Hepatic Drug Elimination in PregnancyR01HD058299 · NICHD · UNIVERSITY OF KENTUCKY · PI VORE, MARY · 2008 to 2010
$987k
NICHD NIH HHS HD58299NICHD NIH HHS R01 HD058299
6 · The paper itself

Abstract

backgroundMultidrug resistance-associated protein 2 (MRP2; ABCC2) mediates the biliary excretion of glutathione, glucuronide, and sulfate conjugates of endobiotics and xenobiotics. Single nucleotide polymorphisms (SNPs) of MRP2 contribute to interindividual variability in drug disposition and ultimately in drug response.

objectivesTo characterize the transport function of human wild-type (WT) MRP2 and four SNP variants, S789F, A1450T, V417I, and T1477M.

methodsThe four SNP variants were expressed in Sf9 cells using recombinant baculovirus infection. The kinetic parameters [Km, (μmol/l); V(max), (pmol/mg/min); the Hill coefficient] of ATP-dependent transport of leukotriene C(4) (LTC(4)), estradiol-3-glucuronide (E(2)3G), estradiol-17β-glucuronide (E(2)17G), and tauroursodeoxycholic acid (TUDC) were determined in Sf9-derived plasma membrane vesicles. Transport activity was normalized for expression level.

resultsThe V(max) for transport activity was decreased for all substrates for S789F, and for all substrates except E(2)17G for A1450T. V417I showed decreased apparent affinity for LTC(4), E(2)3G, and E(2)17G, whereas transport was similar between wild-type (WT) and T1477M, except for a modest increase in TUDC transport. Examination of substrate-stimulated MRP2-dependent ATPase activity of S789F and A1450T, SNPs located in MRP2 nucleotide-binding domains (NBDs), demonstrated significantly decreased ATPase activity and only modestly decreased affinity for ATP compared with WT.

conclusionSNPs in the NBDs (S789F in the D-loop of NBD1, or A1450T near the ABC signature motif of NBD2) variably decreased the transport of all substrates. V417I in membrane spanning domain 1 selectively decreased the apparent affinity for the glutathione and glucuronide conjugated substrates, whereas the T1477M SNP in the carboxyl terminus altered only TUDC transport.

Indexed as

Adenosine TriphosphatasesATP-Binding Cassette, Sub-Family C ProteinsBaculoviridaeBiomarkers, PharmacologicalDrug Resistance, MultipleEstradiolGenetic VectorsGlucuronidesGlutathioneHumansLeukotriene C4Multidrug Resistance-Associated Protein 2Polymorphism, Single NucleotideTaurochenodeoxycholic AcidABCC2 protein, humanAdenosine TriphosphatasesATP-Binding Cassette, Sub-Family C ProteinsBiomarkers, PharmacologicalEstradiolestradiol-17 beta-glucuronideestradiol-3-glucuronideGlucuronidesGlutathioneLeukotriene C4Multidrug Resistance-Associated Protein 2Taurochenodeoxycholic Acidursodoxicoltaurine

Identifiers

PMID21691255
PMCPMC3640355
OpenAlexW1999617569

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.