Evidence map›Paper›PMID 21689519›Full record

ArticleBiophysical journal2011

Mechanisms for size-dependent protein segregation at immune synapses assessed with molecular rulers.

Juha-Matti Alakoskela, Apurba L Koner, Dominika Rudnicka, Karsten Köhler, Mark Howarth, Daniel M Davis

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
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  5. Article
  6. Trapping or slowing the diffusion of T cell receptors at close contacts initiates T cell signaling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. A cell topography-based mechanism for ligand discrimination by the T cell receptor.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. T Cell Microvilli: Sensors or Senders?Frontiers in immunology · 2019
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Neuroendocrine regulation of inflammation.Seminars in immunology · 2014
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Juha-Matti AlakoskelaSir Alexander Fleming Building, Division of Cell and Molecular Biology, Imperial College London, London, UK.
Apurba L Koner
Dominika Rudnicka
Karsten Köhler
Mark Howarth
Daniel M Davis
Imperial College London · GBUniversity of Oxford · GB

Funding

Medical Research Council G0900850Medical Research Council G1001044Wellcome Trust 085457-Z-08-Z
6 · The paper itself

Abstract

Immunological synapses are specialized intercellular contacts formed by several types of immune cells in contact with target cells or antigen-presenting cells. A late-stage immune synapse is commonly a bulls-eye pattern of immune cell receptor-ligand pairs surrounded by integrin complexes. Based on crystal structures, the intermembrane distance would be ∼15 nm for many immune cell receptor-ligand pairs, but ∼40 nm for integrin-ligand pairs. Close proximity of these two classes of intermembrane bonds would require significant membrane bending and such proteins can segregate according to their size, which may be key for receptor triggering. However, tools available to evaluate the intermembrane organization of the synapse are limited. Here, we present what we believe to be a novel approach to test the importance of size in the intercellular organization of proteins, using live-cell microscopy of a size-series of fluorescently-labeled molecules and quantum dots to act as molecular rulers. Small particles readily colocalized at the synapse with MHC class I bound to its cognate natural killer cell receptor, whereas particles larger than 15 nm were increasingly segregated from this interaction. Combined with modeling of the partitioning of the particles by scaled-particle adsorption theory, these molecular rulers show how membrane-bending elasticity can drive size-dependent exclusion of proteins within immune synapses.

Indexed as

Particle SizeQuantum DotsCell Line, TumorElasticityFluorescenceFluorescent DyesGreen Fluorescent ProteinsHLA-C AntigensHumansImmunological SynapsesIntercellular Adhesion Molecule-1ProteinsRecombinant Fusion ProteinsFluorescent DyesGreen Fluorescent ProteinsHLA-C*06 antigenHLA-C AntigensIntercellular Adhesion Molecule-1ProteinsRecombinant Fusion Proteins

Identifiers

PMID21689519
PMCPMC3123984
OpenAlexW2168688681

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.