Evidence map›Paper›PMID 21689450›Full record

ArticleBMC immunology2011

Ten-color flow cytometry reveals distinct patterns of expression of CD124 and CD126 by developing thymocytes.

Chibing Tan, Ashlee A Taylor, Matthew Z Coburn, Julie H Marino, C Justin Van De Wiele, T Kent Teague

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chibing TanDepartment of Surgery, University of Oklahoma College of Medicine, Tulsa, OK, USA.
Ashlee A Taylor
Matthew Z Coburn
Julie H Marino
C Justin Van De Wiele
T Kent Teague
University of Oklahoma · US

Funding

NHLBI NIH HHS HR07-095
6 · The paper itself

Abstract

backgroundWe have developed a 12-parameter/10-color flow cytometric staining method for the simultaneous detection and characterization of 21 mouse thymocyte subpopulations that represent discreet stages of T cell development. To demonstrate the utility of this method, we assessed cytokine receptor expression on mouse thymocyte subsets. These experiments revealed distinct patterns of surface expression of receptors for the cytokines IL-4 and IL-6.

resultsThe IL-4 receptor α chain (CD124) was highly expressed on the earliest thymocyte subsets, then downregulated prior to T cell receptor β-selection and finally upregulated in the CD4/CD8 double positive cells prior to positive selection. The IL-6 receptor α chain (CD126) showed a different pattern of expression. It was expressed on the most mature subsets within the CD4 and CD8 single positive (SP) compartments and was absent on all other thymocytes with the exception of a very small cKit-CD4-CD8- population. Intracellular staining of SP thymocytes for phosphorylated STAT-1 demonstrated that IL-6 signaling was confined to the most mature SP subsets.

conclusionsThis 12-parameter staining methodology uses only commercially available fluorochrome-coupled monoclonal antibodies and therefore could be employed by any investigator with access to a 4-laser flow cytometer. This novel staining scheme allowed us to easily phenotype thymocyte subpopulations that span across development, from the early thymic progenitors (ETPs) to the most mature subsets of the CD4 and CD8 single positive populations.

Indexed as

AnimalsCell DifferentiationCell LineageCells, CulturedCell SeparationFlow CytometryGene Expression Regulation, DevelopmentalInterleukin-4 Receptor alpha SubunitInterleukin-6 Receptor alpha SubunitMiceMice, Inbred C57BLPhosphorylationSignal TransductionSTAT1 Transcription FactorThymus GlandT-LymphocytesInterleukin-4 Receptor alpha SubunitInterleukin-6 Receptor alpha SubunitSTAT1 Transcription Factor

Identifiers

PMID21689450
PMCPMC3130696
OpenAlexW2051397049

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.