Evidence map›Paper›PMID 21687667›Full record

ArticlePloS one2011

Dinosaur peptides suggest mechanisms of protein survival.

James D San Antonio, Mary H Schweitzer, Shane T Jensen, Raghu Kalluri, Michael Buckley, Joseph P R O Orgel

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 57 citations in OpenAlex.

  1. Evidence for Endogenous Collagen inAnalytical chemistry · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Resurrecting the Dead (Molecules).Computational and structural biotechnology journal · 2017
    Review
  12. Article
  13. Article
  14. Article
  15. Body fluid identification by mass spectrometry.International journal of legal medicine · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 2 countries.

James D San AntonioOperations, Orthovita, Inc., Malvern, Pennsylvania, United States of America. jsanantonio@orthovita.com
Mary H Schweitzer
Shane T Jensen
Raghu Kalluri
Michael Buckley
Joseph P R O Orgel
Illinois Institute of Technology · USMassachusetts Institute of Technology · USMontana State University · USOrthoVirginia · USUniversity of Pennsylvania · USUniversity of York · GB

Funding

X-RAY STUDIES OF NEUROFIBRILLARY TANGLES IN ALZHEIMER'S DISEASE BRAIN TISSUEP41RR008630 · NCRR · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2001 to 2011
$14.4M
TYPE IV COLLAGEN IN ALPORT SYNDROME PATHOGENESISR01DK055001 · NIDDK · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU · 1999 to 2014
$4.3M
NCRR NIH HHS P41 RR008630NCRR NIH HHS RR 08630NIDDK NIH HHS DK 55001NIDDK NIH HHS R01 DK055001
6 · The paper itself

Abstract

Eleven collagen peptide sequences recovered from chemical extracts of dinosaur bones were mapped onto molecular models of the vertebrate collagen fibril derived from extant taxa. The dinosaur peptides localized to fibril regions protected by the close packing of collagen molecules, and contained few acidic amino acids. Four peptides mapped to collagen regions crucial for cell-collagen interactions and tissue development. Dinosaur peptides were not represented in more exposed parts of the collagen fibril or regions mediating intermolecular cross-linking. Thus functionally significant regions of collagen fibrils that are physically shielded within the fibril may be preferentially preserved in fossils. These results show empirically that structure-function relationships at the molecular level could contribute to selective preservation in fossilized vertebrate remains across geological time, suggest a 'preservation motif', and bolster current concepts linking collagen structure to biological function. This non-random distribution supports the hypothesis that the peptides are produced by the extinct organisms and suggests a chemical mechanism for survival.

Indexed as

DinosaursPeptide MappingAmino Acid SequenceAnimalsCollagen Type IConserved SequenceFossilsHumansModels, MolecularMolecular Sequence DataPeptide FragmentsProtein Structure, SecondaryRatsReptilian ProteinsCollagen Type IPeptide FragmentsReptilian Proteins

Identifiers

PMID21687667
PMCPMC3110760
OpenAlexW2115941732

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.