Evidence map›Paper›PMID 21686257›Full record

ArticleCellular logistics2011

The compartmentalized vessel: The bacterial cell as a model for subcellular organization (a tale of two studies).

Orna Amster-Choder

Open access · bronzeAbstract read
In one paragraph

Article in Cellular logistics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Phenotypic Heterogeneity in Sugar Utilization byFrontiers in microbiology · 2017
    Article
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Orna Amster-ChoderDepartment of Microbiology and Molecular Genetics; IMRIC; Hadassah Medical School; The Hebrew University; Jerusalem, Israel.
Hebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The traditional view of bacterial cells as non-compartmentalized, which is based on the lack of membrane-engulfed organelles, is currently being reassessed. Many studies in recent years led to the realization that bacteria have an intricate internal organization that is vital for various cellular processes. Specifically, various machineries were shown to localize to the poles of rod-shaped bacteria. We have recently shown that the control center of the PTS system, which governs carbon uptake and metabolism, localizes to the poles of E. coli cells. Notably, the machinery that controls bacterial taxis along chemical gradients (chemotaxis) has a similar localization pattern. The fact that the two systems need to communicate in order to generate an optimal metabolic response suggests that their similar spatial organization is not a coincidence. Rather, due to their special characteristics, the poles may function as hubs for signaling systems to allow for efficient crosstalk between different pathways in order to improve coordination of their actions.The regulatory mechanisms that underlie the spatial and temporal organization of microbial cells are largely unknown. Thus far, these mechanisms were believed to rely on embedded features of the localized proteins. In another study, we have recently shown that mRNAs are capable of migrating to particular domains in the bacterial cell where their protein products are required. In contrast to the view that transcription and translation are coupled in bacteria, localization of bacterial transcripts may occur in a translation-independent manner. Hence, it seems that the mechanistic basis for separating transcription and translation is more primitive than assumed up until now. We propose that bacteria synthesize proteins either by a transcription-translation coupled mechanism or by transporting mRNAs away from the transcription apparatus. Obviously, eukaryotic cells rely on the latter mechanism. Hence, the capacity of prokaryotic cells to adopt the division between transcription and translation was a crucial step in the evolution of nucleus-containing cells from the prokaryotic origin. Summarily, the line that separates cells with nucleus and cells without is fading, leading to the realization that bacteria are suitable model organisms for studying universal mechanisms that underlie spatial regulation of cellular processes.

Identifiers

PMID21686257
PMCPMC3116588
OpenAlexW2409808796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.