Evidence map›Paper›PMID 21685499›Full record

ArticleMolecular & cellular proteomics : MCP2011

Mass spectrometric identification of novel lysine acetylation sites in huntingtin.

Xin Cong, Jason M Held, Francesco DeGiacomo, Akilah Bonner, Jan Marie Chen, Birgit Schilling, Gregg A Czerwieniec, Bradford W Gibson, Lisa M Ellerby

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Site-specific ubiquitination of pathogenic huntingtin attenuates its deleterious effects.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Review
  8. Acetylation of AβACS chemical neuroscience · 2020
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Protein post-translational modifications:Computational and structural biotechnology journal · 2017
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xin CongBuck Institute for Research on Aging, Novato, CA 94945, USA.
Jason M Held
Francesco DeGiacomo
Akilah Bonner
Jan Marie Chen
Birgit Schilling
Gregg A Czerwieniec
Bradford W Gibson
Lisa M Ellerby
Buck Institute for Research on Aging · US

Funding

Mass spectrometry and imaging technologies in GerosciencePL1AG032118 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI GIBSON, BRADFORD WAYNE · 2007 to 2011
$4.5M
TRIPLET REPEAT DISEASE: REQUIREMENT FOR CASPASE CLEAVAGER01NS040251 · NINDS · BUCK INSTITUTE FOR RESEARCH ON AGING · PI ELLERBY, LISA M. · 1999 to 2007
$3.1M
HDACs in Neurodegeneration and AgingRL1NS062413 · NINDS · BUCK INSTITUTE FOR RESEARCH ON AGING · PI ELLERBY, LISA M · 2007 to 2011
$2.3M
4000 Q TRAP TRIPLE QUADRUPOLE/LINEAR ION TRAP LC/MS/MS: NEUROSCIENCE PARKINSON'SS10RR021222 · NCRR · BUCK INSTITUTE FOR AGE RESEARCH · PI GIBSON, BRADFORD WAYNE · 2005 to 2005
$500k
QSTAR Elite Quadrupole-o-TOF LC/MS/MS SystemS10RR024615 · NCRR · BUCK INSTITUTE FOR RESEARCH ON AGING · PI GIBSON, BRADFORD WAYNE · 2007 to 2007
$466k
NCRR NIH HHS S10 RR0021222NCRR NIH HHS S10 RR021222NCRR NIH HHS S10 RR024615NCRR NIH HHS S10RR024615NIA NIH HHS PL1 AG032118NINDS NIH HHS NS040251NINDS NIH HHS NS062413NINDS NIH HHS R01 NS040251NINDS NIH HHS RL1 NS062413
6 · The paper itself

Abstract

Huntingtin (Htt) is a protein with a polyglutamine stretch in the N-terminus and expansion of the polyglutamine stretch causes Huntington's disease (HD). Htt is a multiple domain protein whose function has not been well characterized. Previous reports have shown, however, that post-translational modifications of Htt such as phosphorylation and acetylation modulate mutant Htt toxicity, localization, and vesicular trafficking. Lysine acetylation of Htt is of particular importance in HD as this modification regulates disease progression and toxicity. Treatment of mouse models with histone deacetylase inhibitors ameliorates HD-like symptoms and alterations in acetylation of Htt promotes clearance of the protein. Given the importance of acetylation in HD and other diseases, we focused on the systematic identification of lysine acetylation sites in Htt23Q (1-612) in a cell culture model using mass spectrometry. Myc-tagged Htt23Q (1-612) overexpressed in the HEK 293T cell line was immunoprecipitated, separated by SDS-PAGE, digested and subjected to high performance liquid chromatography tandem MS analysis. Five lysine acetylation sites were identified, including three novel sites Lys-178, Lys-236, Lys-345 and two previously described sites Lys-9 and Lys-444. Antibodies specific to three of the Htt acetylation sites were produced and confirmed the acetylation sites in Htt. A multiple reaction monitoring MS assay was developed to compare quantitatively the Lys-178 acetylation level between wild-type Htt23Q and mutant Htt148Q (1-612). This report represents the first comprehensive mapping of lysine acetylation sites in N-terminal region of Htt.

Indexed as

Protein Processing, Post-TranslationalAcetylationAnimalsAntibodiesBrainDisease ProgressionHEK293 CellsHistone Deacetylase InhibitorsHumansHuntingtin ProteinHuntington DiseaseLysineMass SpectrometryMiceNerve Tissue ProteinsNuclear ProteinsAntibodiesHistone Deacetylase InhibitorsHTT protein, humanHuntingtin ProteinLysineNerve Tissue ProteinsNuclear Proteins

Identifiers

PMID21685499
PMCPMC3205870
OpenAlexW2101251291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.