Evidence map›Paper›PMID 21682279›Full record

ArticleJournal of the American Chemical Society2011

Dramatic destabilization of transmembrane helix interactions by features of natural membrane environments.

Heedeok Hong, James U Bowie

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 95 citations in OpenAlex.

  1. Review
  2. bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Thermodynamic analysis of the GASBiophysical journal · 2023
    Article
  12. Review
  13. Untangling the complexity of membrane protein folding.Current opinion in structural biology · 2022
    Review
  14. Lipid bilayer induces contraction of the denatured state ensemble of a helical-bundle membrane protein.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. Spiers Memorial Lecture: Analysis andFaraday discussions · 2021
    Article
  17. Review
  18. Membrane proteins enter the fold.Current opinion in structural biology · 2021
    Review
  19. How bilayer properties influence membrane protein folding.Protein science : a publication of the Protein Society · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Heedeok HongDepartment of Chemistry and Biochemistry, UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095, USA.
James U Bowie
University of California, Los Angeles · US

Funding

Membrane Protein StabilityR01GM063919 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOWIE, JAMES U · 2001 to 2021
$5.6M
Improving membrane protein crystallizationR01GM081783 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOWIE, JAMES U · 2007 to 2009
$853k
NIGMS NIH HHS R01 GM063919NIGMS NIH HHS R01GM063919NIGMS NIH HHS R01 GM081783NIGMS NIH HHS R01GM081783
6 · The paper itself

Abstract

Membrane proteins have evolved to fold and function in a lipid bilayer, so it is generally assumed that their stability should be optimized in a natural membrane environment. Yet optimal stability is not always in accord with optimization of function, so evolutionary pressure, occurring in a complex membrane environment, may favor marginal stability. Here, we find that the transmembrane helix dimer, glycophorin A (GpATM), is actually much less stable in the heterogeneous environment of a natural membrane than it is in model membranes and even common detergents. The primary destabilizing factors are electrostatic interactions between charged lipids and charged GpATM side chains, and nonspecific competition from other membrane proteins. These effects overwhelm stabilizing contributions from lateral packing pressure and excluded volume. Our work illustrates how evolution can employ membrane composition to modulate protein stability.

Indexed as

Amino Acid SequenceEscherichia coliEscherichia coli ProteinsGlycophorinsMembrane LipidsModels, MolecularMolecular Sequence DataProtein MultimerizationProtein StabilityProtein Structure, SecondaryProteolipidsEscherichia coli ProteinsGlycophorinsMembrane LipidsProteolipidsproteoliposomes

Identifiers

PMID21682279
PMCPMC3140635
OpenAlexW2019725758

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.