ReviewNature reviews. Genetics2011
Genome-wide genetic marker discovery and genotyping using next-generation sequencing.
Review in Nature reviews. Genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,004 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
1,004 citing papers in PubMed, 1 synthesis or guideline pooled it.
- State of the Art of the Molecular Biology of the Interaction between Cocoa and Witches' Broom Disease: A Systematic Review.International journal of molecular sciences · 2023Pooled it
- Dissecting genetic architecture of growth and yield traits in horsegram using GWAS.Molecular genetics and genomics : MGG · 2026Article
- Genetic dissection of grain yield and correlated proxy traits under suboptimal conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Scalable medium-density genotyping platforms for cultivar identification, pedigree authentication, marker-assisted and genomic selection, and other applications in strawberry.G3 (Bethesda, Md.) · 2026Article
- Identification of variants from gene expression data of opioid-addicted patients.Journal of applied genetics · 2026Article
- Polygenic discrimination of leaf morphotypes in alpine Heldreichia bupleurifolia (Brassicaceae) across its natural range.Annals of botany · 2026Article
- Integrated Analysis of SNPs and Structural Variations via High-depth Whole-genome Sequencing Reveals the Genetic Architecture and Optimizes Genomic Prediction in Chickens.Poultry science · 2026Article
- Genomic signatures of native (Japanese) and introduced (Oceanian) populations of the Asian longhorned tickPNAS nexus · 2026Article
- A preliminary whole-genome survey of longfin snake eel Pisodonophis cancrivorus (Richardson, 1848).Genetica · 2026Article
- Speciation of European bullheads (Cottus spp.): The next problem for taxonomy of northern freshwater fishes.Journal of fish biology · 2026Review
- Genomic Data Describe Population Structure but Struggle to Estimate Directed Connectivity Networks.Molecular ecology resources · 2026Article
- Genetic diversity of Camelina sativa: implications for sustainable crop improvement through Genotyping-by-Sequencing (GBS).BMC plant biology · 2026Article
- Migratory jackpot individuals fuel rapid ecotype shifts in Galaxias fishes.Nature communications · 2026Article
- Genome-Wide Resequencing Reveals High Connectivity and Localized Adaptive Signals in Manila Clam (Animals : an open access journal from MDPI · 2026Article
- Genetic diversity and chemotypic variation of Gentiana rhodantha: insights into the genetic basis of active compound accumulation.BMC plant biology · 2026Article
- Genome-wide association and genomic prediction of anthracnose (Colletotrichum dematium) resistance in spinach.The plant genome · 2026Article
- GS-Impute: A neural network framework for accurate imputation of low-density markers in across-population genomic selection.Plant communications · 2026Article
- Proximal regularization of deep residual neural networks applied to high-dimensional genomic data.Briefings in bioinformatics · 2026Article
- Conspecific Scaffold-Level Genome Assembly Outperforms Heterospecific Chromosome-Level Assemblies for Assessing Genetic Indicators in a Threatened Marine Fish.Evolutionary applications · 2026Article
- Identification of Genomic Regions for Partial Resistance to Soybean Rust Under Field Conditions Using FarmCPU and Machine Learning Approaches.Plants (Basel, Switzerland) · 2026Article
944 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
Abstract
The advent of next-generation sequencing (NGS) has revolutionized genomic and transcriptomic approaches to biology. These new sequencing tools are also valuable for the discovery, validation and assessment of genetic markers in populations. Here we review and discuss best practices for several NGS methods for genome-wide genetic marker development and genotyping that use restriction enzyme digestion of target genomes to reduce the complexity of the target. These new methods -- which include reduced-representation sequencing using reduced-representation libraries (RRLs) or complexity reduction of polymorphic sequences (CRoPS), restriction-site-associated DNA sequencing (RAD-seq) and low coverage genotyping -- are applicable to both model organisms with high-quality reference genome sequences and, excitingly, to non-model species with no existing genomic data.
Indexed as
Identifiers
21681211What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.