Evidence map›Paper›PMID 21679315›Full record

ArticleThe New phytologist2011

MtbHLH1, a bHLH transcription factor involved in Medicago truncatula nodule vascular patterning and nodule to plant metabolic exchanges.

Laurence Godiard, Agnès Lepage, Sandra Moreau, Damien Laporte, Marion Verdenaud, Ton Timmers, Pascal Gamas

Open access · bronzeAbstract read
In one paragraph

Article in The New phytologist, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
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  8. Arbuscular-Mycorrhizal Symbiosis inInternational journal of molecular sciences · 2023
    Article
  9. Article
  10. Article
  11. Heterologous Expression of Dehydration-InducibleInternational journal of molecular sciences · 2022
    Article
  12. Review
  13. Review
  14. Transcription Factor bHLH2 RepressesPlant physiology · 2019
    Article
  15. Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Laurence GodiardLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Agnès LepageLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Sandra MoreauLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Damien LaporteJian-Qiu Wu's laboratory, Ohio State University, 612 Biosciences Building, 484 W 12th Ave, Columbus, OH 43210, USA.
Marion VerdenaudLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Ton TimmersLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Pascal GamasLaboratoire des Interactions Plantes Microorganismes, Unité Mixte de Recherche, Institut National de la Recherche Agronomique - Centre National de la Recherche Scientifique 441/2594, F-31320 Castanet Tolosan, France.
Institut National de la Recherche Agronomique · MAThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed at defining the role of a basic helix-loop-helix (bHLH) transcription factor gene from Medicago truncatula, MtbHLH1, whose expression is upregulated during the development of root nodules produced upon infection by rhizobia bacteria. We used MtbHLH1 promoter::GUS fusions and quantitative reverse-transcription polymerase chain reaction analyses to finely characterize the MtbHLH1 expression pattern. We altered MtbHLH1 function by expressing a dominantly repressed construct (CRES-T approach) and looked for possible MtbHLH1 target genes by transcriptomics. We found that MtbHLH1 is expressed in nodule primordia cells derived from pericycle divisions, in nodule vascular bundles (VBs) and in uninfected cells of the nitrogen (N) fixation zone. MtbHLH1 is also expressed in root tips, lateral root primordia cells and root VBs, and induced upon auxin treatment. Altering MtbHLH1 function led to an unusual phenotype, with a modified patterning of nodule VB development and a reduced growth of aerial parts of the plant, even though the nodules were able to fix atmospheric N. Several putative MtbHLH1 regulated genes were identified, including an asparagine synthase and a LOB (lateral organ boundary) transcription factor. Our results suggest that the MtbHLH1 gene is involved in the control of nodule vasculature patterning and nutrient exchanges between nodules and roots.

Indexed as

Basic Helix-Loop-Helix ProteinsBody PatterningGene Expression ProfilingGene Expression Regulation, PlantIndoleacetic AcidsMedicago truncatulaMolecular Sequence DataNitrogen FixationPhenotypePlant Growth RegulatorsPlant ProteinsPlant Root NodulationPlants, Genetically ModifiedPromoter Regions, GeneticRhizobiumRoot Nodules, PlantBasic Helix-Loop-Helix ProteinsIndoleacetic AcidsPlant Growth RegulatorsPlant Proteins

Identifiers

PMID21679315
PMCPMC3206218
OpenAlexW1985595484

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.