Evidence map›Paper›PMID 21673133›Full record

ArticlePlant physiology2011

Increase in tomato locule number is controlled by two single-nucleotide polymorphisms located near WUSCHEL.

Stéphane Muños, Nicolas Ranc, Emmanuel Botton, Aurélie Bérard, Sophie Rolland, Philippe Duffé, Yolande Carretero, Marie-Christine Le Paslier, Corinne Delalande, Mondher Bouzayen and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 170 papers.

0numbers the graph read from it
0cells of the map it votes in
170citing papers in PubMed
17.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

170 citing papers in PubMed, 347 citations in OpenAlex.

  1. Multi-variant GWAS and genomic prediction dissect the genetic architecture underlying tomato fruit weight.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. WUSCHEL Transcription Factor: From Stem Cell Maintenance to Crop Improvement.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  13. Review
  14. Reproductive Diversity in Cultivated Tomato (Plants (Basel, Switzerland) · 2026
    Article
  15. Article
  16. Fruit weight regulation by a paralog of Cell Size Regulator (CSR) in tomato and other crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  17. Review
  18. Article
  19. Article
  20. Review

110 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Stéphane MuñosINRA, UR1052 Génétique et Amélioration des Fruits et Légumes, Domaine Saint-Maurice, 84143 Montfavet Cedex, France. stephane.munos@toulouse.inra.fr
Nicolas Ranc
Emmanuel Botton
Aurélie Bérard
Sophie Rolland
Philippe Duffé
Yolande Carretero
Marie-Christine Le Paslier
Corinne Delalande
Mondher Bouzayen
Dominique Brunel
Mathilde Causse
Genetics and Improvement of Fruit and Vegetables · FRUniversité de Toulouse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In tomato (Solanum lycopersicum) fruit, the number of locules (cavities containing seeds that are derived from carpels) varies from two to up to 10 or more. Locule number affects fruit shape and size and is controlled by several quantitative trait loci (QTLs). The large majority of the phenotypic variation is explained by two of these QTLs, fasciated (fas) and locule number (lc), that interact epistatically with one another. FAS has been cloned, and mutations in the gene are described as key factors leading to the increase in fruit size in modern varieties. Here, we report the map-based cloning of lc. The lc QTL includes a 1,600-bp region that is located 1,080 bp from the 3' end of WUSCHEL, which encodes a homeodomain protein that regulates stem cell fate in plants. The molecular evolution of lc showed a reduction of diversity in cultivated accessions with the exception of two single-nucleotide polymorphisms. These two single-nucleotide polymorphisms were shown to be responsible for the increase in locule number. An evolutionary model of locule number is proposed herein, suggesting that the fas mutation appeared after the mutation in the lc locus to confer the extreme high-locule-number phenotype.

Indexed as

AgricultureBase SequenceEvolution, MolecularFlowersGene Expression Regulation, PlantGenes, PlantGenetic Association StudiesModels, GeneticMolecular Sequence DataOrgan SizePhenotypePhysical Chromosome MappingPlant ProteinsPolymorphism, Single NucleotideReproducibility of ResultsSeedsPlant Proteins

Identifiers

PMID21673133
PMCPMC3149950
OpenAlexW2089839075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.