Evidence map›Paper›PMID 21671600›Full record

ArticleJournal of the American Chemical Society2011

Using covalent dimers of human carbonic anhydrase II to model bivalency in immunoglobulins.

Eric T Mack, Phillip W Snyder, Raquel Perez-Castillejos, George M Whitesides

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Eric T MackDepartment of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, USA.
Phillip W Snyder
Raquel Perez-Castillejos
George M Whitesides
Harvard University · US

Funding

Multivalency: Mechanisms and ApplicationsR01GM030367 · NIGMS · HARVARD UNIVERSITY · PI WHITESIDES, GEORGE M · 1985 to 2010
$3.0M
ENZYMES AS CATALYSTS IN THE SYNTHESIS OF CARBOHYDRATESR37GM030367 · NIGMS · HARVARD UNIVERSITY · PI WHITESIDES, GEORGE M · 1991 to 2000
$572k
Carbonic Anhydrase as a Model to Understand Divalency and Multivalent LinkersF32GM076971 · NIGMS · HARVARD UNIVERSITY · PI MACK, ERIC T · 2007 to 2008
$96k
NIGMS NIH HHS F32 GM076971NIGMS NIH HHS GM030367NIGMS NIH HHS GM076971NIGMS NIH HHS R01 GM030367NIGMS NIH HHS R37 GM030367
6 · The paper itself

Abstract

This paper describes the development of a new bivalent system comprising synthetic dimers of carbonic anhydrase linked chemically through thiol groups of cysteine residues introduced by site-directed mutagenesis. These compounds serve as models with which to study the interaction of bivalent proteins with ligands presented at the surface of mixed self-assembled monolayers (SAMs). Monovalent carbonic anhydrase (CA) binds to benzenesulfonamide ligands presented on the surface of the SAM with K(d)(surf) = 89 nM. The synthetic bivalent proteins--inspired by the structure of immunoglobulins--bind bivalently to the sulfonamide-functionalized SAMs with low nanomolar avidities (K(d)(avidity,surf) = 1-3 nM); this difference represents a ~50-fold enhancement of bivalent over monovalent association. The paper describes dimers of CA having (i) different lengths of the covalent linker that joined the two proteins and (ii) different points of attachment of the linker to the protein (either near the active site (C133) or distal to the active site (C185)). Comparison of the thermodynamics of their interactions with SAMs presenting arylsulfonamide groups demonstrated that varying the length of the linker between the molecules of CA had virtually no effect on the rate of association, or on the avidity of these dimers with ligand-presenting surfaces. Varying the point of attachment of the linker between monomeric CA's also had almost no effect on the avidity of the dimers, although changing the point of attachment affected the rates of binding and unbinding. These observations indicate that the avidities of these bivalent proteins, and by inference the avidities of structurally similar bivalent proteins such as IgG, are unexpectedly insensitive to the structure of the linker connecting them.

Indexed as

BenzenesulfonamidesCarbonic Anhydrase IICatalytic DomainDimerizationHumansImmunoglobulinsLigandsModels, MolecularMolecular StructureStereoisomerismSulfonamidesSurface PropertiesThermodynamicsBenzenesulfonamidesCarbonic Anhydrase IIImmunoglobulinsLigandsSulfonamides

Identifiers

PMID21671600
PMCPMC3145338
OpenAlexW2070801978

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.