Evidence map›Paper›PMID 21671358›Full record

ReviewBirth defects research. Part C, Embryo today : reviews2011

Epigenetics, development, and cancer: zebrafish make their mark..

Raksha Mudbhary, Kirsten C Sadler

Abstract readReview
In one paragraph

Review in Birth defects research. Part C, Embryo today : reviews, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Long Term Culture of Germ-Free Zebrafish Using Gamma-Irradiated Feeds.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Transcriptomics in toxicology.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2017
    Review
  8. Atrazine exposure decreases the activity of DNMTs, global DNA methylation levels, and dnmt expression.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2017
    Article
  9. Review
  10. Zebrafish Discoveries in Cancer Epigenetics.Advances in experimental medicine and biology · 2016
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Raksha MudbharyDivision of Liver Diseases, Department of Medicine, Mount Sinai School of Medicine, New York, New York, USA.
Kirsten C Sadler
Icahn School of Medicine at Mount Sinai · US

Funding

Role of Uhrf1 in Liver Development, Regeneration and CarciogenesisR01DK080789 · NIDDK · NEW YORK UNIVERSITY · PI Kirsten C Sadler Edepli · 2009 to 2026
$5.2M
NIDDK NIH HHS 3R01DK080789-01A1S1NIDDK NIH HHS 5R01DK080789-02NIDDK NIH HHS R01 DK080789
6 · The paper itself

Abstract

Zebrafish embryos are an exceptional system for studying vertebrate development. Historically, studies using zebrafish to uncover key players in developmentally regulated gene expression have entailed detailed analysis of transcription factors. It is now apparent that epigenetic modifications of both DNA and histone tails are equally important in the regulation of gene expression during development. As such, blocking the function of key epigenetic modifiers impairs development, albeit with surprising tissue specificity. For instance, DNA methylation is an important epigenetic mark that is depleted in embryos lacking dnmt1 and uhrf1. These embryos display developmental defects in the eye, liver, pancreas, and larval lethality. Interestingly, human tumors derived from these same organs have aberrant changes in DNA methylation and altered expression of genes that are thought to contribute to formation of these cancers. These observations have provided a mechanistic basis for treating cancer with drugs that block the enzymes that facilitate DNA and histone modifications. Thus, it is important to understand the consequences of targeting these factors in a whole animal. We review the use of zebrafish for probing the genetic, cellular, and physiological response to alterations in the epigenome and highlight exciting data illustrating that epigenetic studies using zebrafish can inform and impact cancer biology.

Indexed as

DNA MethylationModels, AnimalZebrafishAcetylationAnimalsEmbryonic DevelopmentEpigenesis, GeneticGene Expression Regulation, DevelopmentalHistonesLiverMethylationNeoplasmsHistones

Identifiers

PMID21671358
PMCPMC3855246
OpenAlexW2077074605

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.