Evidence map›Paper›PMID 21670263›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Structural and functional characterization of an atypical activation domain in erythroid Kruppel-like factor (EKLF).

Caroline Mas, Mathieu Lussier-Price, Shefali Soni, Thomas Morse, Geneviève Arseneault, Paola Di Lello, Julien Lafrance-Vanasse, James J Bieker, James G Omichinski

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 51 citations in OpenAlex.

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  15. Krüppel-Like Factor 15 ModulatesFrontiers in cell and developmental biology · 2021
    Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Caroline MasDépartement de Biochimie, Université de Montréal, C.P. 6128 Succursale Centre-Ville, Montréal, Canada QC H3C 3J7.
Mathieu Lussier-Price
Shefali Soni
Thomas Morse
Geneviève Arseneault
Paola Di Lello
Julien Lafrance-Vanasse
James J Bieker
James G Omichinski
Université de Montréal · CAIcahn School of Medicine at Mount Sinai · US

Funding

Function of Putative Determinant in HematopoiesisR01DK046865 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI JAMES J BIEKER · 1993 to 2026
$11.2M
CIHR MOP-209826NIDDK NIH HHS DK46865NIDDK NIH HHS R01 DK046865
6 · The paper itself

Abstract

Erythroid Krüppel-like factor (EKLF) plays an important role in erythroid development by stimulating β-globin gene expression. We have examined the details by which the minimal transactivation domain (TAD) of EKLF (EKLFTAD) interacts with several transcriptional regulatory factors. We report that EKLFTAD displays homology to the p53TAD and, like the p53TAD, can be divided into two functional subdomains (EKLFTAD1 and EKLFTAD2). Based on sequence analysis, we found that EKLFTAD2 is conserved in KLF2, KLF4, KLF5, and KLF15. In addition, we demonstrate that EKLFTAD2 binds the amino-terminal PH domain of the Tfb1/p62 subunit of TFIIH (Tfb1PH/p62PH) and four domains of CREB-binding protein/p300. The solution structure of the EKLFTAD2/Tfb1PH complex indicates that EKLFTAD2 binds Tfb1PH in an extended conformation, which is in contrast to the α-helical conformation seen for p53TAD2 in complex with Tfb1PH. These studies provide detailed mechanistic information into EKLFTAD functions as well as insights into potential interactions of the TADs of other KLF proteins. In addition, they suggest that not only have acidic TADs evolved so that they bind using different conformations on a common target, but that transitioning from a disordered to a more ordered state is not a requirement for their ability to bind multiple partners.

Indexed as

Amino Acid SequenceBinding SitesCalorimetryCloning, MolecularHumansK562 CellsKruppel-Like Factor 4Kruppel-Like Transcription FactorsModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedNuclear Magnetic Resonance, BiomolecularProtein BindingProtein ConformationSequence Homology, Amino AcidTranscription Factorserythroid Kruppel-like factorKLF4 protein, humanKruppel-Like Factor 4Kruppel-Like Transcription FactorsTranscription Factors

Identifiers

PMID21670263
PMCPMC3127900
OpenAlexW2074982061

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.