Evidence map›Paper›PMID 21670155›Full record

ArticleMolecular and cellular biology2011

Hypoxia-induced epigenetic regulation and silencing of the BRCA1 promoter.

Yuhong Lu, Adrian Chu, Mitchell S Turker, Peter M Glazer

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 134 citations in OpenAlex.

  1. Review
  2. Hypoxic adaptation theory of cancer.Frontiers in cell and developmental biology · 2026
    Article
  3. Article
  4. Hypoxia Imaging as a Radiomics Signature in Tumors Using NovelbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Hypoxia alters the response of ovarian cancer cells to the mitomycin C drug.Frontiers in cell and developmental biology · 2025
    Article
  11. Review
  12. Article
  13. Review
  14. International journal of molecular sciences · 2022
    Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yuhong LuDepartments of Therapeutic Radiology and Genetics, Yale University School of Medicine, New Haven, CT 06510, USA.
Adrian Chu
Mitchell S Turker
Peter M Glazer
Oregon Health & Science University · USYale University · US

Funding

TUMOR SELECTIVE INACTIVATION OF THE REPAIR PROTEIN AGTP01CA129186 · NCI · YALE UNIVERSITY · PI GLAZER, PETER M · 2007 to 2012
$8.5M
Oncometabolites, DNA Repair, and CancerR01ES005775 · NIEHS · YALE UNIVERSITY · PI PETER M GLAZER · 1998 to 2026
$8.0M
Epigenetic Regulation in Hypoxic Cancer CellsR01CA148996 · NCI · YALE UNIVERSITY · PI GLAZER, PETER M, YUN, ZHONG · 2010 to 2014
$1.6M
RESEARCH TRAINING: RADIATION THERAPY, BIOLOGY, PHYSICST32CA009259 · NCI · YALE UNIVERSITY · PI GLAZER, PETER M · 1985 to 2009
$1.4M
Gene silencing in mammalian cells induced by environmental exposureR21ES015191 · NIEHS · OREGON HEALTH & SCIENCE UNIVERSITY · PI TURKER, MITCHELL S · 2006 to 2007
$416k
NCI NIH HHS P01 CA129186NCI NIH HHS P01CA129186NCI NIH HHS R01 CA148996NCI NIH HHS R01CA148996NCI NIH HHS T32 CA009259NCI NIH HHS T32CA009259NIEHS NIH HHS R01 ES005775NIEHS NIH HHS R01ES005775NIEHS NIH HHS R01ES015191NIEHS NIH HHS R21 ES015191
6 · The paper itself

Abstract

Disruption of the BRCA1 tumor suppressor can be caused not only by inherited mutations in familial cancers but also by BRCA1 gene silencing in sporadic cancers. Hypoxia, a key feature of the tumor microenvironment, has been shown to downregulate BRCA1 at the transcriptional level via repressive E2F4/p130 complexes. Here we showed that hypoxia also drives epigenetic modification of the BRCA1 promoter, with decreased H3K4 methylation as a key repressive modification produced by the lysine-specific histone demethylase LSD1. We also observed increased H3K9 methylation coupled with decreased H3K9 acetylation. Similar modifications were seen in the RAD51 promoter, which is also downregulated by hypoxia, whereas exactly opposite changes were seen in the promoter of the hypoxia-inducible gene VEGF. In cells containing the BRCA1 promoter driving a selectable HPRT gene, long-term silencing of the promoter was observed following exposure to hypoxic stress. Clones with silenced BRCA1 promoters were detected at frequencies of 2% or more following hypoxia, but at less than 6 × 10(-5) without hypoxia. The silenced clones showed decreased H3K4 methylation and decreased H3K9 acetylation in the BRCA1 promoters, consistent with the acute effects of hypoxic stress. Hypoxia-induced BRCA1 promoter silencing persisted in subsequent normoxic conditions but could be reversed by treatment with a histone deacetylase (HDAC) inhibitor but not with a DNA methylation inhibitor. Interestingly, treatment of cells with inhibitors of poly(ADP-ribose) polymerase (PARP) can cause short-term repression of BRCA1 expression, but such treatment does not produce H3K4 or H3K9 histone modification or BRCA1 promoter silencing. These results suggest that hypoxia is a driving force for long-term silencing of BRCA1, thereby promoting genome instability and tumor progression.

Indexed as

Epigenesis, GeneticGenes, BRCA1Gene SilencingPromoter Regions, GeneticCell Line, TumorGenes, Tumor SuppressorGenomic InstabilityHistone DeacetylasesHistonesHumansHypoxiaMethylationHistone DeacetylasesHistones

Identifiers

PMID21670155
PMCPMC3147797
OpenAlexW2137708206

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.