Evidence map›Paper›PMID 21668969›Full record

ArticleBMC microbiology2011

New V. cholerae atypical El Tor variant emerged during the 2006 epidemic outbreak in Angola.

Daniela Ceccarelli, Matteo Spagnoletti, Donatella Bacciu, Piero Cappuccinelli, Mauro M Colombo

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Review
  3. Resistance ofFrontiers in pharmacology · 2023
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  6. Antimicrobial resistance ofAfrican journal of laboratory medicine · 2018
    Review
  7. Article
  8. Identification of AtypicalFrontiers in microbiology · 2017
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Daniela CeccarelliDipartimento di Biologia e Biotecnologie Charles Darwin, Sapienza Università di Roma, Rome 00185, Italy. daniela.ceccarelli@uniroma1.it
Matteo Spagnoletti
Donatella Bacciu
Piero Cappuccinelli
Mauro M Colombo
Sapienza University of Rome · ITUniversity of Sassari · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundV. cholerae is the etiological agent of cholera, a major public health concern in most developing countries. Virulence of V. cholerae relies on the powerful cholera toxin, encoded by the CTX prophage. The emergence of new pathogenic variants in the recent years has been mostly associated with new CTX prophage rearrangements.

resultsIn this retrospective study, we show that the epidemic V. cholerae O1 El Tor strain responsible for the 2006 outbreak in Angola is clonally and genetically different from El Tor strains circulating in the 1990s in the same area. Strains from 2006 carry ICEVchAng3 of the SXT/R391 family. This ICE is associated with a narrower multidrug resistance profile compared to the one conferred by plasmid p3iANG to strains of the 1990s. The CTX prophage carried by 2006 El Tor strains is characterized by rstR(ET) and ctxB(Cla) alleles organized in a RS1-RS2-Core array on chromosome I. Interestingly, the newly emerging atypical strain belongs to a clade previously known to comprise only clinical isolates from the Indian subcontinent that also contain the same ICE of the SXT/R391 family.

conclusionsOur findings remark the appearance of a novel V. cholerae epidemic variant in Africa with a new CTXΦ arrangement previously described only in the Indian Subcontinent.

Indexed as

Disease OutbreaksAngolaBacterial Typing TechniquesCholeraCholera ToxinDNA, ViralDrug Resistance, Multiple, BacterialGenes, BacterialGenes, ViralGenotypeHumansMolecular Sequence DataProphagesRetrospective StudiesSequence Analysis, DNAVibrio cholerae O1Cholera ToxinDNA, Viral

Identifiers

PMID21668969
PMCPMC3131240
OpenAlexW2147762604

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.