Evidence map›Paper›PMID 21667205›Full record

ArticleChromosoma2011

Painting the chromosomes of Brachypodium: current status and future prospects.

Dominika Idziak, Alexander Betekhtin, Elzbieta Wolny, Karolina Lesniewska, Jonathan Wright, Melanie Febrer, Michael W Bevan, Glyn Jenkins, Robert Hasterok

Abstract readEvaluation Study
In one paragraph

Article in Chromosoma, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Chromosome painting in plants: history and future perspectives.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Review
  2. Article
  3. Review
  4. Cytomolecular Organisation of the Nuclear Genome.International journal of molecular sciences · 2022
    Article
  5. Article
  6. Article
  7. The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum.The Plant journal : for cell and molecular biology · 2020
    Article
  8. Development and application of oligonucleotide-based chromosome painting for chromosome 4D of Triticum aestivum L.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  9. Article
  10. Comparatively Barcoded Chromosomes ofInternational journal of molecular sciences · 2019
    Article
  11. Article
  12. Fluorescence in situ hybridization in plants: recent developments and future applications.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019
    Review
  13. DetectingInternational journal of molecular sciences · 2019
    Article
  14. Article
  15. Whole-chromosome paints in maize reveal rearrangements, nuclear domains, and chromosomal relationships.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Article
  17. Cell Wall Epitopes and Endoploidy as Reporters of Embryogenic Potential inInternational journal of molecular sciences · 2018
    Article
  18. Article
  19. The Plant cell · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dominika IdziakDepartment of Plant Anatomy and Cytology, University of Silesia, Jagiellonska, Katowice, Poland. didziak@us.edu.pl
Alexander Betekhtin
Elzbieta Wolny
Karolina Lesniewska
Jonathan Wright
Melanie Febrer
Michael W Bevan
Glyn Jenkins
Robert Hasterok

Funding

Biotechnology and Biological Sciences Research Council BB/E004725/1Biotechnology and Biological Sciences Research Council BBS/E/J/000CA352
6 · The paper itself

Abstract

Chromosome painting is one of the most powerful and spectacular tools of modern molecular cytogenetics, enabling complex analyses of nuclear genome structure and evolution. For many years, this technique was restricted to the study of mammalian chromosomes, as it failed to work in plant genomes due mainly to the presence of large amounts of repetitive DNA common to all the chromosomes of the complement. The availability of ordered, chromosome-specific BAC clones of Arabidopsis thaliana containing relatively little repetitive genomic DNA enabled the first chromosome painting in dicotyledonous plants. Here, we show for the first time chromosome painting in three different cytotypes of a monocotyledonous plant-the model grass, Brachypodium distachyon. Possible directions of further detailed studies are proposed, such as the evolution of grass karyotypes, the behaviour of meiotic chromosomes, and the analysis of chromosome distribution at interphase.

Indexed as

BrachypodiumChromosome PaintingChromosomes, PlantEvolution, MolecularGenome, PlantKaryotype

Identifiers

PMID21667205
PMCPMC3174371

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.