Evidence map›Paper›PMID 21667037›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2011

Quantitative trait loci and underlying candidate genes controlling agronomical and fruit quality traits in octoploid strawberry (Fragaria × ananassa).

Yasmín Zorrilla-Fontanesi, Amalia Cabeza, Pedro Domínguez, Juan Jesús Medina, Victoriano Valpuesta, Beatrice Denoyes-Rothan, José F Sánchez-Sevilla, Iraida Amaya

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Marker-Assisted Selection in Breeding for Fruit Trait Improvement: A Review.International journal of molecular sciences · 2023
    Review
  11. Article
  12. FvNST1b NAC Protein Induces Secondary Cell Wall Formation in Strawberry.International journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Genome-Wide Analysis of MYB10 Transcription Factor inInternational journal of molecular sciences · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Allelic Variation ofThe Plant cell · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Yasmín Zorrilla-FontanesiIFAPA-Centro de Churriana, Cortijo de la Cruz S/N, Churriana, 29140, Málaga, Spain.
Amalia Cabeza
Pedro Domínguez
Juan Jesús Medina
Victoriano Valpuesta
Beatrice Denoyes-Rothan
José F Sánchez-Sevilla
Iraida Amaya
Andalusian Institute of Agricultural and Fisheries Research and Training · ESInstitut National de la Recherche Agronomique du Niger · NEInstitut national de recherche en informatique et en automatique · FRInternational Centre for Advanced Mediterranean Agronomic Studies · ESUniversidad de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breeding for fruit quality traits in strawberry (Fragaria × ananassa, 2n = 8x = 56) is complex due to the polygenic nature of these traits and the octoploid constitution of this species. In order to improve the efficiency of genotype selection, the identification of quantitative trait loci (QTL) and associated molecular markers will constitute a valuable tool for breeding programs. However, the implementation of these markers in breeding programs depends upon the complexity and stability of QTLs across different environments. In this work, the genetic control of 17 agronomical and fruit quality traits was investigated in strawberry using a F(1) population derived from an intraspecific cross between two contrasting selection lines, '232' and '1392'. QTL analyses were performed over three successive years based on the separate parental linkage maps and a pseudo-testcross strategy. The integrated strawberry genetic map consists of 338 molecular markers covering 37 linkage groups, thus exceeding the 28 chromosomes. 33 QTLs were identified for 14 of the 17 studied traits and approximately 37% of them were stable over time. For each trait, 1-5 QTLs were identified with individual effects ranging between 9.2 and 30.5% of the phenotypic variation, indicating that all analysed traits are complex and quantitatively inherited. Many QTLs controlling correlated traits were co-located in homoeology group V, indicating linkage or pleiotropic effects of loci. Candidate genes for several QTLs controlling yield, anthocyanins, firmness and L-ascorbic acid are proposed based on both their co-localization and predicted function. We also report conserved QTLs among strawberry and other Rosaceae based on their syntenic location.

Indexed as

Quantitative Trait LociAnthocyaninsChromosome MappingChromosomes, PlantFragariaFruitGenetic LinkageGenetic MarkersPhenotypePolymorphism, GeneticPolyploidyAnthocyaninsGenetic Markers

Identifiers

PMID21667037
OpenAlexW1990431185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.