Evidence map›Paper›PMID 21666498›Full record

ArticleJournal of neuropathology and experimental neurology2011

p16INK4A and p14ARF tumor suppressor pathways are deregulated in malignant rhabdoid tumors.

Sriram Venneti, Paul Le, Daniel Martinez, Katherine W Eaton, Nikhil Shyam, Kelly L Jordan-Sciutto, Bruce Pawel, Jaclyn A Biegel, Alexander R Judkins

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neuropathology and experimental neurology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Sriram VennetiDivision of Neuropathology, Department of Pathology and Laboratory Medicine, University of Pennsylvania Medical Center, Philadelphia, Pennsylvania, USA.
Paul Le
Daniel Martinez
Katherine W Eaton
Nikhil Shyam
Kelly L Jordan-Sciutto
Bruce Pawel
Jaclyn A Biegel
Alexander R Judkins
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

MOLECULAR CYTOGENETICS: PEDIATRIC CNS TUMORSR01CA046274 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI BIEGEL, JACLYN A · 1989 to 2012
$2.7M
NCI NIH HHS R01 CA046274PHS HHS R0146274
6 · The paper itself

Abstract

Malignant rhabdoid tumors (MRTs) are aggressive tumors associated with mutations in the SMARCB1 gene. In experimental systems, the loss of SMARCB1 is hypothesized to alter p16(INK4A) pathways resulting in the repression of tumor suppressors. To determine whether these pathways are deregulated in human MRT, we used immunohistochemistry on tissue microarrays to evaluate p16(INK4A)/E2F1/RB and p14(ARF)/MDM2/p53 pathways in 25 atypical teratoid/rhabdoid tumors (AT/RT) and 11 non-CNS MRT. p16(INK4A) was negative or showed focal weak expression. p16(INK4A) downstream targets CDK4/cyclin D1/ppRB were variably expressed at moderate to low levels; E2F1 was negative. Unexpectedly, p14(ARF) expression was seen in many cases, which correlated positively with p53 and inversely with MDM2 immunostaining in AT/RT. TP53 mutational analysis in 19 of 25 AT/RT and in 8 of 11 non-CNS MRT cases showed point mutations in only 3 AT/RT cases, suggesting that p53 expression was driven mainly by p14(ARF). Finally, nucleophosmin, a protein that stabilizes p53, was positive in most cases and colocalized with p53. Together, these data suggest that, in MRT, there is deregulation not only of p16(INK4A) but also of the p14(ARF) pathway. These results provide insights into cell cycle deregulation in the pathogenesis of human MRT and may aid in the design and evaluation of potential therapies for these tumors.

Indexed as

Child, PreschoolChromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p16DNA-Binding ProteinsDNA Mutational AnalysisFemaleGene Expression Regulation, NeoplasticHumansInfantMaleMicroarray AnalysisSeverity of Illness IndexSignal TransductionSMARCB1 ProteinStatistics, NonparametricTeratomaChromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p16DNA-Binding ProteinsSMARCB1 ProteinSMARCB1 protein, humanTranscription FactorsTumor Suppressor Protein p14ARFTumor Suppressor Protein p53

Identifiers

PMID21666498
PMCPMC3145456
OpenAlexW2045941784

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.