Evidence map›Paper›PMID 21666254›Full record

ArticleNucleic acids research2011

Structure-dependent bypass of DNA interstrand crosslinks by translesion synthesis polymerases.

The Vinh Ho, Angelo Guainazzi, Semsi Burak Derkunt, Milica Enoiu, Orlando D Schärer

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 85 citations in OpenAlex.

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  13. Strand Displacement Activity of PrimPol.International journal of molecular sciences · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Mammalian DNA Polymerase Kappa Activity and Specificity.Molecules (Basel, Switzerland) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

The Vinh HoDepartment of Pharmacological Sciences, Stony Brook University, Stony Brook, NY 11794-3400, USA.
Angelo Guainazzi
Semsi Burak Derkunt
Milica Enoiu
Orlando D Schärer
Stony Brook University · USUniversity of Zurich · CH

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Gregory L Hura · 2001 to 2026
$89.6M
NCI NIH HHS CA092584NCI NIH HHS P01 CA092584NIGMS NIH HHS GM08454
6 · The paper itself

Abstract

DNA interstrand crosslinks (ICLs), inhibit DNA metabolism by covalently linking two strands of DNA and are formed by antitumor agents such as cisplatin and nitrogen mustards. Multiple complex repair pathways of ICLs exist in humans that share translesion synthesis (TLS) past a partially processed ICL as a common step. We have generated site-specific major groove ICLs and studied the ability of Y-family polymerases and Pol ζ to bypass ICLs that induce different degrees of distortion in DNA. Two main factors influenced the efficiency of ICL bypass: the length of the dsDNA flanking the ICL and the length of the crosslink bridging two bases. Our study shows that ICLs can readily be bypassed by TLS polymerases if they are appropriately processed and that the structure of the ICL influences which polymerases are able to read through it.

Indexed as

DNA DamageDNA RepairAntineoplastic AgentsCisplatinCross-Linking ReagentsDeoxycytosine NucleotidesDNADNA-Directed DNA PolymeraseMechlorethamineNucleic Acid ConformationNucleotidyltransferasesSaccharomyces cerevisiae ProteinsTemplates, GeneticY-Family DNA Polymerases2'-deoxycytidine 5'-triphosphateAntineoplastic AgentsCisplatinCross-Linking ReagentsDeoxycytosine NucleotidesDNADNA-Directed DNA PolymeraseDNA polymerase zetaMechlorethamineNucleotidyltransferasesREV1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsY-Family DNA Polymerases

Identifiers

PMID21666254
PMCPMC3177197
OpenAlexW2054464804

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.