Evidence map›Paper›PMID 21663470›Full record

ArticleThe New England journal of medicine2011

BRAF mutations in hairy-cell leukemia.

Enrico Tiacci, Vladimir Trifonov, Gianluca Schiavoni, Antony Holmes, Wolfgang Kern, Maria Paola Martelli, Alessandra Pucciarini, Barbara Bigerna, Roberta Pacini, Victoria A Wells and 26 more

Registry-linked trialOpen access · bronzeAbstract readCase Reports
In one paragraph

Article in The New England journal of medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02459743 (Molecular Disease Profile of Haematological Malignancies. A Prospective Registry Study by the Rete Ematologica Lombarda), which is not on this map. Cited by 432 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
432citing papers in PubMed, 1 pooled it
51.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02459743 unknown statusnot on this mapstarted 2015, after this paper: background citation

Molecular Disease Profile of Haematological Malignancies. A Prospective Registry Study by the Rete Ematologica Lombarda (REL) Clinical Network

Typeobservational_patient_registrySponsorUniversity of PaviaRan2015 to 2018Enrolled1,000ConditionsHematological Malignancies
3 · Its place in the literature

Who cites it

432 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,006 citations in OpenAlex.

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372 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

36 authors at 10 institutions in 3 countries.

Enrico TiacciInstitute of Hematology, University of Perugia, Perugia, Italy.
Vladimir Trifonov
Gianluca Schiavoni
Antony Holmes
Wolfgang Kern
Maria Paola Martelli
Alessandra Pucciarini
Barbara Bigerna
Roberta Pacini
Victoria A Wells
Paolo Sportoletti
Valentina Pettirossi
Roberta Mannucci
Oliver Elliott
Arcangelo Liso
Achille Ambrosetti
Alessandro Pulsoni
Francesco Forconi
Livio Trentin
Gianpietro Semenzato
Giorgio Inghirami
Monia Capponi
Francesco Di Raimondo
Caterina Patti
Luca Arcaini
Pellegrino Musto
Stefano Pileri
Claudia Haferlach
Susanne Schnittger
Giovanni Pizzolo
Robin Foà
Laurent Farinelli
Torsten Haferlach
Laura Pasqualucci
Raul Rabadan
Brunangelo Falini
University of Perugia · ITAzienda Ospedaliera di Perugia · ITOspedale Santa Maria · ITColumbia University · USSapienza University of Rome · ITUniversity of Verona · ITCancer Genetics (United States) · USCentro di Riferimento Oncologico della Basilicata · ITUniversity of Catania · ITUniversity of Padua · IT

Funding

Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LIPKIN, W. IAN · 2003 to 2014
$100.8M
Nation Center: Multi-Scale Study- Cellular Networks(RMI)U54CA121852 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2005 to 2015
$37.4M
Integrated discovery and hypothesis testing of new associations in rare diseasesR01LM010140 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI RABADAN, RAUL · 2009 to 2010
$1.1M
NCI NIH HHS U54 CA121852NCI NIH HHS U54-CA121852-05NIAID NIH HHS U54 AI057158NIAID NIH HHS U54-AI057158NLM NIH HHS 1R01LM010140-01NLM NIH HHS R01 LM010140
6 · The paper itself

Abstract

backgroundHairy-cell leukemia (HCL) is a well-defined clinicopathological entity whose underlying genetic lesion is still obscure.

methodsWe searched for HCL-associated mutations by performing massively parallel sequencing of the whole exome of leukemic and matched normal cells purified from the peripheral blood of an index patient with HCL. Findings were validated by Sanger sequencing in 47 additional patients with HCL.

resultsWhole-exome sequencing identified five missense somatic clonal mutations that were confirmed on Sanger sequencing, including a heterozygous mutation in BRAF that results in the BRAF V600E variant protein. Since BRAF V600E is oncogenic in other tumors, further analyses were focused on this genetic lesion. The same BRAF mutation was noted in all the other 47 patients with HCL who were evaluated by means of Sanger sequencing. None of the 195 patients with other peripheral B-cell lymphomas or leukemias who were evaluated carried the BRAF V600E variant, including 38 patients with splenic marginal-zone lymphomas or unclassifiable splenic lymphomas or leukemias. In immunohistologic and Western blot studies, HCL cells expressed phosphorylated MEK and ERK (the downstream targets of the BRAF kinase), indicating a constitutive activation of the RAF-MEK-ERK mitogen-activated protein kinase pathway in HCL. In vitro incubation of BRAF-mutated primary leukemic hairy cells from 5 patients with PLX-4720, a specific inhibitor of active BRAF, led to a marked decrease in phosphorylated ERK and MEK. CONCLUSIONS; The BRAF V600E mutation was present in all patients with HCL who were evaluated. This finding may have implications for the pathogenesis, diagnosis, and targeted therapy of HCL. (Funded by Associazione Italiana per la Ricerca sul Cancro and others.).

Indexed as

MutationAdultAgedExtracellular Signal-Regulated MAP KinasesFemaleHumansLeukemia, Hairy CellLymphoma, B-CellMaleMAP Kinase Kinase KinasesMiddle AgedProto-Oncogene Proteins B-rafSequence Analysis, DNABRAF protein, humanExtracellular Signal-Regulated MAP KinasesMAP Kinase Kinase KinasesProto-Oncogene Proteins B-raf

Identifiers

PMID21663470
PMCPMC3689585
OpenAlexW2099780734

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.