Evidence map›Paper›PMID 21654727›Full record

ArticleEuropean journal of human genetics : EJHG2011

Duplication at chromosome 2q31.1-q31.2 in a family presenting syndactyly and nystagmus.

Jamal Ghoumid, Joris Andrieux, Bernard Sablonnière, Sylvie Odent, Nathalie Philippe, Xavier Zanlonghi, Pascale Saugier-Veber, Thomas Bardyn, Sylvie Manouvrier-Hanu, Muriel Holder-Espinasse

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in European journal of human genetics : EJHG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Impact of copy number variations (CNVs) on long-range gene regulation at the HoxD locus.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jamal GhoumidDepartment of Molecular Biology, University Hospital, Lille, France.
Joris Andrieux
Bernard Sablonnière
Sylvie Odent
Nathalie Philippe
Xavier Zanlonghi
Pascale Saugier-Veber
Thomas Bardyn
Sylvie Manouvrier-Hanu
Muriel Holder-Espinasse
Université de Lille · FRLille’s Cardiology Hospital · FRNantes Université · FRUniversité de Rouen Normandie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HOXD genes encode transcription factors involved in the antero-posterior patterning of the limb bud and in the specification of fingers. During the embryo development, HOXD genes are expressed, following a spatio-temporal colinearity that involves at least three regions, centrometric and telomeric to this cluster. Here, we describe a father and a daughter presenting a 3-4 hand bilateral syndactyly associated with a nystagmus. Array-comparative genomic hybridisation showed a 3.8 Mb duplication at 2q31.1-q31.2, comprising 27 genes including the entire HOXD cluster. We performed expression studies in lymphoblasts by reverse transcription-PCR and observed an HOXD13 and HOXD10 overexpression, whereas the HOXD12 expression was decreased. HOXD13 and HOXD10 overexpression, associated with a misregulation of at least HOXD12, may therefore induce the syndactyly. Deletions of the HOXD cluster and its regulatory sequences induce hand malformations and, particularly, finger anomalies. Recently, smaller duplications of the same region have been reported in association with a mesomelic dysplasia, type Kantaputra. We discuss the variable phenotypes associated with such 2q duplications.

Indexed as

Chromosome DuplicationTrisomyAdultChildChromosomes, Human, Pair 2Comparative Genomic HybridizationFamily HealthFemaleGenetic Association StudiesHomeodomain ProteinsHumansIn Situ Hybridization, FluorescenceKaryotypeMaleMultigene FamilyNystagmus, PathologicHomeodomain Proteins

Identifiers

PMID21654727
PMCPMC3198150
OpenAlexW2030678803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.