Evidence map›Paper›PMID 21654541›Full record

ArticlePancreas2011

Aberrant expressions of AP-2α splice variants in pancreatic cancer.

Catherine Carrière, Sarah Mirocha, Sophie Deharvengt, Jason R Gunn, Murray Korc

Open access · greenAbstract read
In one paragraph

Article in Pancreas, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Catherine CarrièreDepartment of Medicine, Dartmouth Medical School, Hanover, NH, USA.
Sarah Mirocha
Sophie Deharvengt
Jason R Gunn
Murray Korc
Dartmouth College · USDartmouth–Hitchcock Medical Center · USDartmouth Hospital · GB

Funding

Novel aspects of Epithelial-Mesenchymal Transition(EMT)in pancreatic cancerR01CA075059 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI KORC, MURRAY · 1997 to 2018
$4.3M
Dysregulation of TGF Beta Action Pancreatic CancerR37CA075059 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI KORC, MURRAY · 2008 to 2012
$2.2M
NCI NIH HHS CA-75059NCI NIH HHS R01 CA075059NCI NIH HHS R37 CA075059
6 · The paper itself

Abstract

objectivesThe present study was conducted to evaluate the expression and function of AP-2α isoforms in pancreatic ductal adenocarcinoma.

methodsThe expression of AP-2α was evaluated at the RNA level by reverse transcription-polymerase chain reaction and at the protein level by Western blotting and immunofluorescence. Its function as a transcription factor was evaluated in transient transfection experiments: DNA binding properties by electromobility shift assay and transactivation capabilities by luciferase assay.

resultsMultiple alternative splicing events of AP-2α messenger occurred in all human pancreatic cancer cell lines, including a novel isoform, termed variant 6, which was not present in HeLa cells. At the protein level, except for 1 cell line, all pancreatic cancer cell lines expressed high nuclear levels of AP-2α. We also showed that AP-2α expressed by the pancreatic cancer cell lines could bind its cognate recognition site and activate transcription. However, variant 6, although not able to activate transcription, did not act in a dominant negative manner when cotransfected with the full-length protein.

conclusionsMultiple isoforms of AP-2α are highly expressed in pancreatic cancer cell lines including a new isoform, AP-2α variant 6, which seems to be pancreatic cancer specific and is deprived of transcriptional activity.

Indexed as

Gene ExpressionAlternative SplicingBase SequenceCarcinoma, Pancreatic DuctalCell Line, TumorDNA, NeoplasmDNA PrimersGenetic VariationHumansPancreatic NeoplasmsProtein IsoformsProtein Structure, TertiaryRNA, MessengerRNA, NeoplasmSequence DeletionTranscriptional ActivationDNA, NeoplasmDNA PrimersProtein IsoformsRNA, MessengerRNA, NeoplasmTranscription Factor AP-2

Identifiers

PMID21654541
PMCPMC3116516
OpenAlexW2030314608

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.