Evidence map›Paper›PMID 21652779›Full record

ArticlemBio2011

Chromosomal rearrangements in Salmonella enterica serovar Typhi strains isolated from asymptomatic human carriers.

T David Matthews, Wolfgang Rabsch, Stanley Maloy

Abstract read
In one paragraph

Article in mBio, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Evolving Threats: LeveragingbioRxiv : the preprint server for biology · 2025
    Article
  4. Genomic diversity of non-typhoidalMicrobial genomics · 2025
    Article
  5. Complete genome of a rareMicrobiology resource announcements · 2024
    Article
  6. Article
  7. Impact ofEvolution letters · 2022
    Article
  8. Article
  9. Article
  10. Review
  11. Revisiting PersistentPathogens (Basel, Switzerland) · 2021
    Review
  12. Article
  13. Microbial genomics · 2020
    Article
  14. Spatial and Temporal Patterns of Typhoid and Paratyphoid Fever Outbreaks: A Worldwide Review, 1990-2018.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Review
  15. Review
  16. Evolution of Salmonella within Hosts.Trends in microbiology · 2018
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

T David MatthewsCenter for Microbial Sciences, Department of Biology, San Diego State University, San Diego, California, USA.
Wolfgang Rabsch
Stanley Maloy

Funding

Research Education CoreU54CA132384 · NCI · SAN DIEGO STATE UNIVERSITY · PI CRIPPS, RICHARD MATTHEW, CROWE, SHEILA E. · 2008 to 2022
$20.7M
Research Education CoreU54CA132379 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ARREDONDO, ELVA M, CROWE, SHEILA E. · 2008 to 2021
$16.1M
NCI NIH HHS 1U54CA132379NCI NIH HHS 1U54CA132384NCI NIH HHS U54 CA132379NCI NIH HHS U54 CA132384
6 · The paper itself

Abstract

Host-specific serovars of Salmonella enterica often have large-scale chromosomal rearrangements that occur by recombination between rrn operons. Two hypotheses have been proposed to explain these rearrangements: (i) replichore imbalance from horizontal gene transfer drives the rearrangements to restore balance, or (ii) the rearrangements are a consequence of the host-specific lifestyle. Although recent evidence has refuted the replichore balance hypothesis, there has been no direct evidence for the lifestyle hypothesis. To test this hypothesis, we determined the rrn arrangement type for 20 Salmonella enterica serovar Typhi strains obtained from human carriers at periodic intervals over multiple years. These strains were also phage typed and analyzed for rearrangements that occurred over long-term storage versus routine culturing. Strains isolated from the same carrier at different time points often exhibited different arrangement types. Furthermore, colonies isolated directly from the Dorset egg slants used to store the strains also had different arrangement types. In contrast, colonies that were repeatedly cultured always had the same arrangement type. Estimated replichore balance of isolated strains did not improve over time, and some of the rearrangements resulted in decreased replicore balance. Our results support the hypothesis that the restricted lifestyle of host-specific Salmonella is responsible for the frequent chromosomal rearrangements in these serovars.

Indexed as

Gene RearrangementBacteriophage TypingCarrier StateChromosomes, BacterialFemaleGenomic InstabilityHumansLongitudinal StudiesRecombination, GeneticrRNA OperonSalmonella typhiTyphoid Fever

Identifiers

PMID21652779
PMCPMC3107234

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.