Evidence map›Paper›PMID 21652716›Full record

ReviewThe Journal of biological chemistry2011

KAP1 protein: an enigmatic master regulator of the genome.

Sushma Iyengar, Peggy J Farnham

Open access · hybridAbstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 251 papers.

0numbers the graph read from it
0cells of the map it votes in
251citing papers in PubMed
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

251 citing papers in PubMed, 377 citations in OpenAlex.

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191 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sushma IyengarFrom the Genetics Graduate Group, University of California, Davis, California 95616, USA.
Peggy J Farnham
University of Southern California · US

Funding

Production Center for Global Mapping of Regulatory ElementsU54HG004558 · NHGRI · YALE UNIVERSITY · PI SNYDER, MICHAEL P. · 2007 to 2011
$15.4M
TRANSCRIPTIONAL REGULATION OF GROWTH-RELATED GENESR01CA045240 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI FARNHAM, PEGGY J · 1992 to 2011
$3.4M
TRANSCRIPTIONAL REGULATION OF GROWTH-RELATED GENESR29CA045240 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI FARNHAM, PEGGY J · 1987 to 1991
–
NCI NIH HHS CA45240NCI NIH HHS R01 CA045240NHGRI NIH HHS HG004558NHGRI NIH HHS U54 HG004558
6 · The paper itself

Abstract

In mammalian cells, multiple cellular processes, including gene silencing, cell growth and differentiation, pluripotency, neoplastic transformation, apoptosis, DNA repair, and maintenance of genomic integrity, converge on the evolutionarily conserved protein KAP1, which is thought to regulate the dynamic organization of chromatin structure via its ability to influence epigenetic patterns and chromatin compaction. In this minireview, we discuss how KAP1 might execute such pleiotropic effects, focusing on genomic targeting mechanisms, protein-protein interactions, specific post-translational modifications of both KAP1 and associated histones, and transcriptome analyses of cells deficient in KAP1.

Indexed as

AnimalsChromatinGene Expression ProfilingGenome, HumanHistonesHumansProtein Processing, Post-TranslationalRepressor ProteinsTripartite Motif-Containing Protein 28ChromatinHistonesRepressor ProteinsTRIM28 protein, humanTripartite Motif-Containing Protein 28

Identifiers

PMID21652716
PMCPMC3143589
OpenAlexW2073285188

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.