Evidence map›Paper›PMID 21652693›Full record

ArticleThe Journal of biological chemistry2011

A crucial sequence for transglutaminase type 2 extracellular trafficking in renal tubular epithelial cells lies in its N-terminal beta-sandwich domain.

Che-Yi Chou, Andrew J Streets, Philip F Watson, Linghong Huang, Elisabetta A M Verderio, Timothy S Johnson

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Trial
  2. Review
  3. Resolution of Eczema with Multivalent Peptides.JID innovations : skin science from molecules to population health · 2022
    Article
  4. The Discovery and Function of Filaggrin.International journal of molecular sciences · 2022
    Review
  5. Article
  6. Spotlight on the Transglutaminase 2-Heparan Sulfate Interaction.Medical sciences (Basel, Switzerland) · 2019
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Cellular functions of tissue transglutaminase.International review of cell and molecular biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Che-Yi ChouAcademic Nephrology Unit (Sheffield Kidney Institute), University of Sheffield, Sheffield S10 2RZ, United Kingdom.
Andrew J Streets
Philip F Watson
Linghong Huang
Elisabetta A M Verderio
Timothy S Johnson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transglutaminase type 2 (TG2) catalyzes the formation of an ε-(γ-glutamyl)-lysine isopeptide bond between adjacent peptides or proteins including those of the extracellular matrix (ECM). Elevated extracellular TG2 leads to accelerated ECM deposition and reduced clearance that underlie tissue scarring and fibrosis. The extracellular trafficking of TG2 is crucial to its role in ECM homeostasis; however, the mechanism by which TG2 escapes the cell is unknown as it has no signal leader peptide and therefore cannot be transported classically. Understanding TG2 transport may highlight novel mechanisms to interfere with the extracellular function of TG2 as isoform-specific TG2 inhibitors remain elusive. Mammalian expression vectors were constructed containing domain deletions of TG2. These were transfected into three kidney tubular epithelial cell lines, and TG2 export was assessed to identify critical domains. Point mutation was then used to highlight specific sequences within the domain required for TG2 export. The removal of β-sandwich domain prevented all TG2 export. Mutations of Asp(94) and Asp(97) within the N-terminal β-sandwich domain were identified as crucial for TG2 externalization. These form part of a previously identified fibronectin binding domain ((88)WTATVVDQQDCTLSLQLTT(106)). However, siRNA knockdown of fibronectin failed to affect TG2 export. The sequence (88)WTATVVDQQDCTLSLQLTT(106) within the β-sandwich domain of TG2 is critical to its export in tubular epithelial cell lines. The extracellular trafficking of TG2 is independent of fibronectin.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBinding SitesCulture Media, ConditionedDNA PrimersEnzyme-Linked Immunosorbent AssayEpithelial CellsFibronectinsGene Knockdown TechniquesGTP-Binding ProteinsKidney TubulesMolecular Sequence DataMutagenesis, Site-DirectedProtein Glutamine gamma Glutamyltransferase 2Protein TransportCulture Media, ConditionedDNA PrimersFibronectinsGTP-Binding ProteinsProtein Glutamine gamma Glutamyltransferase 2RNA, Small InterferingTransglutaminases

Identifiers

PMID21652693
PMCPMC3149372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.