Evidence map›Paper›PMID 21648017›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2011

Gene expression profile of the regeneration epithelium during axolotl limb regeneration.

Leah J Campbell, Edna C Suárez-Castillo, Humberto Ortiz-Zuazaga, Dunja Knapp, Elly M Tanaka, Craig M Crews

Open access · greenAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. A Practical Guide for CRISPR-Cas9-Induced Mutations in Axolotls.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. eLife · 2020
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Leah J CampbellDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, USA.
Edna C Suárez-Castillo
Humberto Ortiz-Zuazaga
Dunja Knapp
Elly M Tanaka
Craig M Crews
Yale University · USBerlin-Brandenburger Centrum für Regenerative Therapien · DEUniversity of Puerto Rico at Río Piedras · PR

Funding

VIRUS E34 TAILSPIKE: MODULE FOR PROTEIN:LPS INTERACTIONP20RR016470 · NCRR · UNIVERSITY OF PUERTO RICO RIO PIEDRAS · PI MEJIAS, IDA A · 2001 to 2011
$31.2M
GENOME RESOURCES FOR MODEL AMPHIBIANSR24RR016344 · NCRR · UNIVERSITY OF KENTUCKY · PI VOSS, STEPHEN RANDAL · 2002 to 2011
$3.5M
Towards Mammalian Limb RegenerationR01GM094944 · NIGMS · YALE UNIVERSITY · PI CREWS, CRAIG M · 2010 to 2013
$1.3M
NCRR NIH HHS P20 RR016470NCRR NIH HHS R24 RR016344NIGMS NIH HHS GM094944NIGMS NIH HHS R01 GM094944
6 · The paper itself

Abstract

Urodele amphibians are unique among adult vertebrates in their ability to regenerate missing limbs. The process of limb regeneration requires several key tissues including a regeneration-competent wound epidermis called the regeneration epithelium (RE). We used microarray analysis to profile gene expression of the RE in the axolotl, a Mexican salamander. A list of 125 genes and expressed sequence tags (ESTs) showed a ≥1.5-fold expression in the RE than in a wound epidermis covering a lateral cuff wound. A subset of the RE ESTs and genes were further characterized for expression level changes over the time-course of regeneration. This study provides the first large scale identification of specific gene expression in the RE.

Indexed as

Ambystoma mexicanumAmphibian ProteinsAnimalsEpitheliumGene Expression ProfilingIn Situ HybridizationOligonucleotide Array Sequence AnalysisRegenerationAmphibian Proteins

Identifiers

PMID21648017
PMCPMC3297817
OpenAlexW1972790229

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.