Evidence map›Paper›PMID 21647532›Full record

ReviewMolecular bioSystems2011

Fishing for function: zebrafish BAC transgenics for functional genomics.

Sumantra Chatterjee, Thomas Lufkin

Open access · greenAbstract readReview
In one paragraph

Review in Molecular bioSystems, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Imaging MyelinationBrain plasticity (Amsterdam, Netherlands) · 2016
    Review
  2. Article
  3. Identifying DistalRSC advances · 2013
    Article
  4. Regulatory genomics: Insights from the zebrafish.Current topics in genetics · 2012
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sumantra ChatterjeeStem Cell and Developmental Biology, Genome Institute of Singapore, Singapore.
Thomas Lufkin
National University of Singapore · SG

Funding

HOMEOBOX GENES AND CRANIOFACIAL MORPHOGENESISR01DE012194 · NIDCR · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI LUFKIN, THOMAS C · 1996 to 2000
$210k
NIDCR NIH HHS R01 DE012194
6 · The paper itself

Abstract

Transgenics using bacterial artificial chromosomes (BACs) offers a great opportunity to look at gene regulation in a developing embryo. The modified BAC containing a reporter inserted just before the translational start site of the gene of interest allows for the visualization of spatio-temporal gene expression. Though this method has been used in the mouse model extensively, its utility in zebrafish studies is relatively new. This review aims to look at the utility of making BAC transgenics in zebrafish and its applications in functional genomics. We look at the various methods to modify the BAC, some limitations and what the future holds.

Indexed as

Chromosomes, Artificial, BacterialTransgenesAnimalsGenomicsZebrafish

Identifiers

PMID21647532
PMCPMC3358332
OpenAlexW1972681512

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.