ArticlePloS one2011
An autotetraploid linkage map of rose (Rosa hybrida) validated using the strawberry (Fragaria vesca) genome sequence.
Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
31 citing papers in PubMed.
- Genetic and Biochemical Aspects of Floral Scents in Roses.International journal of molecular sciences · 2022Review
- Article
- Molecular characteristics of S-RNase alleles as the determinant of self-incompatibility in the style of Fragaria viridis.Horticulture research · 2021Article
- Recent Progress in Enhancing Fungal Disease Resistance in Ornamental Plants.International journal of molecular sciences · 2021Review
- Identification and QTL Analysis of Flavonoids and Carotenoids in Tetraploid Roses Based on an Ultra-High-Density Genetic Map.Frontiers in plant science · 2021Article
- The development of a high-density genetic map significantly improves the quality of reference genome assemblies for rose.Scientific reports · 2019Article
- polymapR-linkage analysis and genetic map construction from F1 populations of outcrossing polyploids.Bioinformatics (Oxford, England) · 2018Article
- Multi-environment QTL analysis of plant and flower morphological traits in tetraploid rose.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- A high-quality genome sequence of Rosa chinensis to elucidate ornamental traits.Nature plants · 2018Article
- Dissecting Key Adaptation Traits in the Polyploid PerennialFrontiers in plant science · 2018Article
- Genotyping-by-sequencing application on diploid rose and a resulting high-density SNP-based consensus map.Horticulture research · 2018Article
- Genetic dissection of adventitious shoot regeneration in roses by employing genome-wide association studies.Plant cell reports · 2017Article
- A high-density SNP genetic map consisting of a complete set of homologous groups in autohexaploid sweetpotato (Ipomoea batatas).Scientific reports · 2017Article
- PERGOLA: fast and deterministic linkage mapping of polyploids.BMC bioinformatics · 2017Article
- Mapping X-Disease Phytoplasma Resistance inFrontiers in plant science · 2017Article
- Nineteenth century French rose (Rosa sp.) germplasm shows a shift over time from a European to an Asian genetic background.Journal of experimental botany · 2016Article
- Genome-Wide Association Analysis of the Anthocyanin and Carotenoid Contents of Rose Petals.Frontiers in plant science · 2016Article
- High-density SNP-based genetic maps for the parents of an outcrossed and a selfed tetraploid garden rose cross, inferred from admixed progeny using the 68k rose SNP array.Horticulture research · 2016Article
- High resolution physical mapping of single gene fragments on pachytene chromosome 4 and 7 of Rosa.BMC genetics · 2015Article
- Genetic variation, heritability and genotype by environment interaction of morphological traits in a tetraploid rose population.BMC genetics · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
Abstract
Polyploidy is a pivotal process in plant evolution as it increase gene redundancy and morphological intricacy but due to the complexity of polysomic inheritance we have only few genetic maps of autopolyploid organisms. A robust mapping framework is particularly important in polyploid crop species, rose included (2n = 4x = 28), where the objective is to study multiallelic interactions that control traits of value for plant breeding. From a cross between the garden, peach red and fragrant cultivar Fragrant Cloud (FC) and a cut-rose yellow cultivar Golden Gate (GG), we generated an autotetraploid GGFC mapping population consisting of 132 individuals. For the map we used 128 sequence-based markers, 141 AFLP, 86 SSR and three morphological markers. Seven linkage groups were resolved for FC (Total 632 cM) and GG (616 cM) which were validated by markers that segregated in both parents as well as the diploid integrated consensus map.The release of the Fragaria vesca genome, which also belongs to the Rosoideae, allowed us to place 70 rose sequenced markers on the seven strawberry pseudo-chromosomes. Synteny between Rosa and Fragaria was high with an estimated four major translocations and six inversions required to place the 17 non-collinear markers in the same order. Based on a verified linear order of the rose markers, we could further partition each of the parents into its four homologous groups, thus providing an essential framework to aid the sequencing of an autotetraploid genome.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.