Evidence map›Paper›PMID 21647227›Full record

ArticlePloS one2011

Towards the human colorectal cancer microbiome.

Julian R Marchesi, Bas E Dutilh, Neil Hall, Wilbert H M Peters, Rian Roelofs, Annemarie Boleij, Harold Tjalsma

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 327 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
327citing papers in PubMed, 8 pooled it
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

327 citing papers in PubMed, 8 syntheses or guidelines pooled it, 555 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Systematic review: The gut microbiota as a link between colorectal cancer and obesity.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2025
    Pooled it
  4. Prevalence of enterotoxigenicFrontiers in cellular and infection microbiology · 2025
    Pooled it
  5. Pooled it
  6. Pooled it
  7. The Human Microbiome in Relation to Cancer Risk: A Systematic Review of Epidemiologic Studies.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Pooled it
  8. World journal of gastroenterology · 2017
    Pooled it
  9. Trial
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  12. Detection ofInternational journal of molecular sciences · 2026
    Article
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  19. JACS Au · 2025
    Article
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267 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Julian R MarchesiSchool of Biosciences, Cardiff University, Cardiff, United Kingdom.
Bas E Dutilh
Neil Hall
Wilbert H M Peters
Rian Roelofs
Annemarie Boleij
Harold Tjalsma
Radboud University Medical Center · NLRadboud University Nijmegen · NLCardiff University · GBCenter for Genomic Science · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiple factors drive the progression from healthy mucosa towards sporadic colorectal carcinomas and accumulating evidence associates intestinal bacteria with disease initiation and progression. Therefore, the aim of this study was to provide a first high-resolution map of colonic dysbiosis that is associated with human colorectal cancer (CRC). To this purpose, the microbiomes colonizing colon tumor tissue and adjacent non-malignant mucosa were compared by deep rRNA sequencing. The results revealed striking differences in microbial colonization patterns between these two sites. Although inter-individual colonization in CRC patients was variable, tumors consistently formed a niche for Coriobacteria and other proposed probiotic bacterial species, while potentially pathogenic Enterobacteria were underrepresented in tumor tissue. As the intestinal microbiota is generally stable during adult life, these findings suggest that CRC-associated physiological and metabolic changes recruit tumor-foraging commensal-like bacteria. These microbes thus have an apparent competitive advantage in the tumor microenvironment and thereby seem to replace pathogenic bacteria that may be implicated in CRC etiology. This first glimpse of the CRC microbiome provides an important step towards full understanding of the dynamic interplay between intestinal microbial ecology and sporadic CRC, which may provide important leads towards novel microbiome-related diagnostic tools and therapeutic interventions.

Indexed as

MetagenomeAgedBacterial AdhesionColorectal NeoplasmsDenaturing Gradient Gel ElectrophoresisDNA FingerprintingDNA, IntergenicFemaleHumansIntestinal MucosaMaleMiddle AgedRibosomesRNA, BacterialRNA, Ribosomal, 16SSequence Analysis, RNADNA, IntergenicRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID21647227
PMCPMC3101260
OpenAlexW2144464830

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.