Evidence map›Paper›PMID 21643987›Full record

ArticleJournal of neuro-oncology2011

Analysis of DNA repair gene polymorphisms and survival in low-grade and anaplastic gliomas.

Shala Ghaderi Berntsson, Carl Wibom, Sara Sjöström, Roger Henriksson, Thomas Brännström, Helle Broholm, Christoffer Johansson, Sarah J Fleming, Patricia A McKinney, Lara Bethke and 4 more

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Article in Journal of neuro-oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Shala Ghaderi BerntssonDepartment of Neuroscience, Neurology, University Hospital, 75185 Uppsala, Sweden. shala.berntsson@hotmail.com
Carl Wibom
Sara Sjöström
Roger Henriksson
Thomas Brännström
Helle Broholm
Christoffer Johansson
Sarah J Fleming
Patricia A McKinney
Lara Bethke
Richard Houlston
Anja Smits
Ulrika Andersson
Beatrice S Melin
Umeå University · SEInstitute of Cancer Research · GBUniversity of Leeds · GBUppsala University Hospital · SECopenhagen University Hospital · DKGentofte Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of this study was to explore the variation in DNA repair genes in adults with WHO grade II and III gliomas and their relationship to patient survival. We analysed a total of 1,458 tagging single-nucleotide polymorphisms (SNPs) that were selected to cover DNA repair genes, in 81 grade II and grade III gliomas samples, collected in Sweden and Denmark. The statistically significant genetic variants from the first dataset (P < 0.05) were taken forward for confirmation in a second dataset of 72 grade II and III gliomas from northern UK. In this dataset, eight gene variants mapping to five different DNA repair genes (ATM, NEIL1, NEIL2, ERCC6 and RPA4) which were associated with survival. Finally, these eight genetic variants were adjusted for treatment, malignancy grade, patient age and gender, leaving one variant, rs4253079, mapped to ERCC6, with a significant association to survival (OR 0.184, 95% CI 0.054-0.63, P = 0.007). We suggest a possible novel association between rs4253079 and survival in this group of patients with low-grade and anaplastic gliomas that needs confirmation in larger datasets.

Indexed as

Polymorphism, Single NucleotideAdultAntineoplastic AgentsBrain NeoplasmsDNA HelicasesDNA RepairDNA Repair EnzymesFemaleGenotypeGliomaHumansKaplan-Meier EstimateMaleMiddle AgedNeoplasm GradingPoly-ADP-Ribose Binding ProteinsAntineoplastic AgentsDNA HelicasesDNA Repair EnzymesERCC6 protein, humanPoly-ADP-Ribose Binding Proteins

Identifiers

PMID21643987
OpenAlexW2066876634

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.