Evidence map›Paper›PMID 21642546›Full record

ArticleThe Plant cell2011

Targeted mRNA oxidation regulates sunflower seed dormancy alleviation during dry after-ripening.

Jérémie Bazin, Nicolas Langlade, Patrick Vincourt, Sandrine Arribat, Sandrine Balzergue, Hayat El-Maarouf-Bouteau, Christophe Bailly

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 2 pooled it
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 2 syntheses or guidelines pooled it, 204 citations in OpenAlex.

  1. Pooled it
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  17. Seed longevity and genome damage.Bioscience reports · 2024
    Review
  18. Response to Cadmium inInternational journal of molecular sciences · 2023
    Article
  19. Review
  20. Imbibitional redox and hormonal priming revealed regulation of oxidative window as a key factor for progression of germination of indica rice cultivars.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Jérémie BazinUR5 EAC7180 Centre National de la Recherche Scientifique, Université Pierre et Marie Curie, Université Paris 06, 75005 Paris, France.
Nicolas Langlade
Patrick Vincourt
Sandrine Arribat
Sandrine Balzergue
Hayat El-Maarouf-Bouteau
Christophe Bailly
Institut National de la Recherche Agronomique · MASorbonne Université · FRUniversité d'Évry Val-d'Essonne · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

After-ripening is the mechanism by which dormant seeds become nondormant during their dry storage after harvest. The absence of free water in mature seeds does not allow detectable metabolism; thus, the processes associated with dormancy release under these conditions are largely unknown. We show here that sunflower (Helianthus annuus) seed alleviation of dormancy during after-ripening is associated with mRNA oxidation and that this oxidation is prevented when seeds are maintained dormant. In vitro approaches demonstrate that mRNA oxidation results in artifacts in cDNA-amplified fragment length polymorphim analysis and alters protein translation. The oxidation of transcripts is not random but selective, and, using microarrays, we identified 24 stored mRNAs that became highly oxidized during after-ripening. Oxidized transcripts mainly correspond to genes involved in responses to stress and in cell signaling. Among them, protein phosphatase 2C PPH1, mitogen-activated protein kinase phosphatase 1, and phenyl ammonia lyase 1 were identified. We propose that targeted mRNA oxidation during dry after-ripening of dormant seeds could be a process that governs cell signaling toward germination in the early steps of seed imbibition.

Indexed as

8-Hydroxy-2'-DeoxyguanosineAnimalsDeoxyguanosineGene Expression ProfilingGerminationHelianthusMicroarray AnalysisMolecular Sequence DataOxidation-ReductionPlant DormancyPlant ProteinsPolymorphism, GeneticPolymorphism, Restriction Fragment LengthProtein BiosynthesisRNA, MessengerSeeds8-Hydroxy-2'-DeoxyguanosineDeoxyguanosinePlant ProteinsRNA, Messenger

Identifiers

PMID21642546
PMCPMC3160027
OpenAlexW2083478074

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.