Evidence map›Paper›PMID 21640380›Full record

ArticleLeukemia research2011

Identification of a novel, tissue-specific ABCG2 promoter expressed in pediatric acute megakaryoblastic leukemia.

Patrick K Campbell, Yang Zong, Shengping Yang, Sheng Zhou, Jeffrey E Rubnitz, Brian P Sorrentino

Open access · greenAbstract read
In one paragraph

Article in Leukemia research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. The Functional Meaning of 5'UTR in Protein-Coding Genes.International journal of molecular sciences · 2023
    Review
  3. Review
  4. Review
  5. Leukemia and ABC transporters.Advances in cancer research · 2015
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Patrick K CampbellDivision of Leukemia/Lymphoma, St. Jude Children's Research Hospital, Memphis, TN, USA.
Yang Zong
Shengping Yang
Sheng Zhou
Jeffrey E Rubnitz
Brian P Sorrentino
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
LABORATORY TRAINING FOR CLINICAL ONCOLOGISTST32CA070089 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DOWNING, JAMES R · 1996 to 2011
$3.7M
The Role of ABC Transporters in Stem CellsR01HL067366 · NHLBI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SORRENTINO, BRIAN P · 2001 to 2008
$3.3M
NCI NIH HHS P30 CA021765NCI NIH HHS T32 CA070089NCI NIH HHS T32-CA070089NHLBI NIH HHS R01 HL067366NHLBI NIH HHS R01-HL67366
6 · The paper itself

Abstract

ABCG2 encodes a transporter protein that is associated with multidrug-resistant phenotypes in many cancers, including acute myeloid leukemia (AML); high levels of expression are generally associated with a poor prognosis. To better understand how expression of ABCG2 is controlled in pediatric AML, we performed a detailed analysis of the ABCG2 transcript isoforms from a variety of tissue sources, including 85 pediatric AML samples. These studies revealed a complex 5' untranslated region (UTR) with 6 novel exons and multiple splice variants. Samples from children with acute megakaryoblastic leukemia (AML FAB-M7) not associated with Down syndrome showed uniformly higher levels of ABCG2 transcripts than samples from children with other AML subtypes. A novel 5' UTR identified 90kb upstream of the exon 2 translation initiation site was expressed only in M7 AML subtypes. An associated upstream promoter fragment was shown to be selectively expressed in megakaryoblastic leukemia cells but not in human epithelial cell lines. These findings identify a new tissue-specific ABCG2 promoter that is selectively expressed in pediatric M7 AML. We also show a relatively high incidence of ABCG2 mRNA expression in non-Down associated M7 AML, which may contribute to the relatively poor prognosis of the M7 AML subtype.

Indexed as

Gene Expression Regulation, NeoplasticTranscription, Genetic5' Flanking RegionAdolescentAlternative SplicingATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 2Base SequenceBlotting, SouthernChildChild, PreschoolExonsHumansInfantInfant, NewbornK562 CellsABCG2 protein, humanATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily G, Member 2Neoplasm ProteinsProtein Isoforms

Identifiers

PMID21640380
PMCPMC3163718
OpenAlexW2165504864

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.