Evidence map›Paper›PMID 21637807›Full record

ArticlePloS one2011

New classes of alanine racemase inhibitors identified by high-throughput screening show antimicrobial activity against Mycobacterium tuberculosis.

Karen G Anthony, Ulrich Strych, Kacheong R Yeung, Carolyn S Shoen, Oriana Perez, Kurt L Krause, Michael H Cynamon, Paul A Aristoff, Raymond A Koski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. D-alanine aminotransferase (Dat) promotesbioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. The Mycobacterial Cell Wall--Peptidoglycan and Arabinogalactan.Cold Spring Harbor perspectives in medicine · 2015
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Karen G AnthonyL2 Diagnostics, LLC, New Haven, Connecticut, United States of America. Karen.Anthony@L2dx.com
Ulrich Strych
Kacheong R Yeung
Carolyn S Shoen
Oriana Perez
Kurt L Krause
Michael H Cynamon
Paul A Aristoff
Raymond A Koski
Saint Anthony College of Nursing · USUniversity of Houston · USUniversity of Otago · NZ

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI FINBERG, ROBERT WILLIAM · 2003 to 2013
$113.7M
Broad-Spectrum Antimicrobials Targeting the D-Alanine PathwayU01AI082081 · NIAID · L2 DIAGNOSTICS, LLC · PI ANTHONY, KAREN G. · 2009 to 2013
$7.0M
Small Molecule Alanine Racemase Inhibitors as Novel Therapeutics for TuberculosisR43AI068161 · NIAID · L2 DIAGNOSTICS, LLC · PI ANTHONY, KAREN G. · 2006 to 2006
$170k
NIAID NIH HHS R43 AI068161NIAID NIH HHS R43AI068161NIAID NIH HHS U01 AI082081NIAID NIH HHS U54 AI057159
6 · The paper itself

Abstract

backgroundIn an effort to discover new drugs to treat tuberculosis (TB) we chose alanine racemase as the target of our drug discovery efforts. In Mycobacterium tuberculosis, the causative agent of TB, alanine racemase plays an essential role in cell wall synthesis as it racemizes L-alanine into D-alanine, a key building block in the biosynthesis of peptidoglycan. Good antimicrobial effects have been achieved by inhibition of this enzyme with suicide substrates, but the clinical utility of this class of inhibitors is limited due to their lack of target specificity and toxicity. Therefore, inhibitors that are not substrate analogs and that act through different mechanisms of enzyme inhibition are necessary for therapeutic development for this drug target. METHODOLOGY/PRINCIPAL

findingsTo obtain non-substrate alanine racemase inhibitors, we developed a high-throughput screening platform and screened 53,000 small molecule compounds for enzyme-specific inhibitors. We examined the 'hits' for structural novelty, antimicrobial activity against M. tuberculosis, general cellular cytotoxicity, and mechanism of enzyme inhibition. We identified seventeen novel non-substrate alanine racemase inhibitors that are structurally different than any currently known enzyme inhibitors. Seven of these are active against M. tuberculosis and minimally cytotoxic against mammalian cells. CONCLUSIONS/SIGNIFICANCE: This study highlights the feasibility of obtaining novel alanine racemase inhibitor lead compounds by high-throughput screening for development of new anti-TB agents.

Indexed as

Alanine DehydrogenaseAlanine RacemaseAnti-Infective AgentsCell DeathEnzyme InhibitorsHeLa CellsHigh-Throughput Screening AssaysHumansInhibitory Concentration 50KineticsMass SpectrometryMicrobial Sensitivity TestsMycobacterium tuberculosisSubstrate SpecificityAlanine DehydrogenaseAlanine RacemaseAnti-Infective AgentsEnzyme Inhibitors

Identifiers

PMID21637807
PMCPMC3102704
OpenAlexW2061917944

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.