Evidence map›Paper›PMID 21633712›Full record

ArticleMolecular vision2011

A novel 1-bp deletion in PITX3 causing congenital posterior polar cataract.

Vanita Berry, Peter J Francis, Quincy Prescott, Naushin H Waseem, Anthony T Moore, Shomi S Bhattacharya

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Investigating the Clinical Characteristics andJournal of ophthalmology · 2023
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  14. Epidemiology and molecular genetics of congenital cataracts.International journal of ophthalmology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Vanita BerryDepartment of Genetics, Institute of Ophthalmology, University College London, London, UK. v.berry@ucl.ac.uk
Peter J Francis
Quincy Prescott
Naushin H Waseem
Anthony T Moore
Shomi S Bhattacharya
University College London · GB

Funding

Wellcome TrustWellcome Trust 063969/Z/01
6 · The paper itself

Abstract

purposeCataracts are the most common cause of blindness worldwide. Inherited cataract is a clinically and genetically heterogeneous disease. Here we report a novel mutation in the paired-like homeodomain 3 (PITX3) gene segregating in a four generation English family with an isolated autosomal dominant posterior polar cataract.

methodsA genome-wide linkage was performed by means of single nucleotide polymorphism (SNP) and microsatellite markers. Linkage analyses were performed with the GeneHunter and MLINK programs. Direct sequencing of PCR products was performed to detect mutation in the gene, using the BigDye version 3.1 and analyzed using Sequence analysis version 5.2.

resultsGenome-wide linkage analysis with SNP markers, identified a disease-haplotype interval on chromosome 10q. Two point positive logarithm of odds (LOD) scores was obtained with markers D10S205 (Z=3.10 at θ=0.00), flanked by markers D10S1709 and D10S543, which harbors the homeobox gene PITX3. Sequence analysis of PITX3 revealed a 1-bp deletion that cosegregated with all the affected members of this family which resulted in a frameshift in codon 181 and likely to produce an aberrant protein consisting of 127 additional residues.

conclusionsThe 542delC is a novel mutation in PITX3 causing an isolated posterior polar cataract.

Indexed as

Gene DeletionCataractChromosomes, Human, Pair 10CytosineExonsGenes, DominantGenetic LinkageGenetic MarkersHaplotypesHomeodomain ProteinsHumansLod ScorePedigreeTranscription FactorsCytosineGenetic Markershomeobox protein PITX3Homeodomain ProteinsTranscription Factors

Identifiers

PMID21633712
PMCPMC3103741
OpenAlexW2164662246

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.