Evidence map›Paper›PMID 21632972›Full record

ArticlePlant physiology2011

Arabidopsis SUMO E3 ligase SIZ1 is involved in excess copper tolerance.

Chyi-Chuann Chen, Yong-Yi Chen, I-Chien Tang, Hong-Ming Liang, Chong-Cheong Lai, Jeng-Min Chiou, Kuo-Chen Yeh

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
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  4. Physiological and Molecular Mechanisms of Plant Responses to Copper Stress.International journal of molecular sciences · 2022
    Review
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  14. Comparative Transcriptomic Studies on a Cadmium HyperaccumulatorInternational journal of molecular sciences · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chyi-Chuann ChenAgricultural Biotechnology Research Center , Academia Sinica, Taipei, Taiwan 11529.
Yong-Yi Chen
I-Chien Tang
Hong-Ming Liang
Chong-Cheong Lai
Jeng-Min Chiou
Kuo-Chen Yeh
Institute of Statistical Science, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The reversible conjugation of the small ubiquitin-like modifier (SUMO) to protein substrates occurs as a posttranslational regulatory process in eukaryotic organisms. In Arabidopsis (Arabidopsis thaliana), several stress-responsive SUMO conjugations are mediated mainly by the SUMO E3 ligase SIZ1. In this study, we observed a phenotype of hypersensitivity to excess copper in the siz1-2 and siz1-3 mutants. Excess copper can stimulate the accumulation of SUMO1 conjugates in wild-type plants but not in the siz1 mutant. Copper accumulated to a higher level in the aerial parts of soil-grown plants in the siz1 mutant than in the wild type. A dramatic difference in copper distribution was also observed between siz1 and wild-type Arabidopsis treated with excess copper. As a result, the shoot-to-root ratio of copper concentration in siz1 is nearly twice as high as that in the wild type. We have found that copper-induced Sumoylation is involved in the gene regulation of metal transporters YELLOW STRIPE-LIKE 1 (YSL1) and YSL3, as the siz1 mutant is unable to down-regulate the expression of YSL1 and YSL3 under excess copper stress. The hypersensitivity to excess copper and anomalous distribution of copper observed in the siz1 mutant are greatly diminished in the siz1ysl3 double mutant and slightly in the siz1ysl1 double mutant. These data suggest that SIZ1-mediated sumoylation is involved specifically in copper homeostasis and tolerance in planta.

Indexed as

Adaptation, PhysiologicalArabidopsisArabidopsis ProteinsCopperGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantLigasesMembrane Transport ProteinsMutationPhenotypePlant RootsPlant ShootsSeedlingsSmall Ubiquitin-Related Modifier ProteinsSumoylationArabidopsis ProteinsCopperLigasesMembrane Transport ProteinsSIZ1 protein, ArabidopsisSmall Ubiquitin-Related Modifier ProteinsUbiquitin-Protein Ligases

Identifiers

PMID21632972
PMCPMC3149952
OpenAlexW2139200475

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.