ArticleMolecular genetics and genomics : MGG2011
Genome-wide analysis of the RING finger gene family in apple.
Article in Molecular genetics and genomics : MGG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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Who cites it
38 citing papers in PubMed, 75 citations in OpenAlex.
- Genome-Wide Characterization and Transcriptomic Analysis Reveal Light-Quality-Responsive RING Zinc Finger Genes in Potatoes.Plants (Basel, Switzerland) · 2026Article
- ZmDRZ1 negatively regulates drought tolerance via modulating ABA signaling pathway in maize.Plant cell reports · 2026Article
- Genome-wide identification and analysis ofFrontiers in plant science · 2026Article
- Overview of RING gene family in maize (Zea mays L.): ZmRING-93 enhances drought tolerance in transgenic Arabidopsis.BMC plant biology · 2025Article
- Systematic Analysis of Cotton RING E3 Ubiquitin Ligase Genes Reveals Their Potential Involvement in Salt Stress Tolerance.International journal of molecular sciences · 2025Article
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- Deciphering the mechanism of E3 ubiquitin ligases in plant responses to abiotic and biotic stresses and perspectives on PROTACs for crop resistance.Plant biotechnology journal · 2024Review
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- RING Zinc Finger Proteins in Plant Abiotic Stress Tolerance.Frontiers in plant science · 2022Review
- Identification of C3H2C3-type RING E3 ubiquitin ligase in grapevine and characterization of drought resistance function of VyRCHC114.BMC plant biology · 2021Article
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- Genome-Wide Identification of the Expansin Gene Family and Its Potential Association with Drought Stress in Moso Bamboo.International journal of molecular sciences · 2020Article
- Molecular dissection of two homoeologous wheat genes encoding RING H2-type E3 ligases: TaSIRFP-3A and TaSIRFP-3B.Planta · 2020Article
- Research Progress on Plant RING-Finger Proteins.Genes · 2019Review
- Article
- Genome-Wide Identification, Evolution, and Expression Analysis of RING Finger Gene Family inInternational journal of molecular sciences · 2019Article
- Identification of transcription factors of nitrate reductase gene promoters and NRE2 cis-element through yeast one-hybrid screening in Nicotiana tabacum.BMC plant biology · 2019Article
- Article
- Genome-wide identification and expression analysis of the B-box gene family in the Apple (Malus domestica Borkh.) genome.Molecular genetics and genomics : MGG · 2018Article
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The RING finger protein family plays a crucial role in plant growth and development and in response to biotic and abiotic stresses. However, no detailed information concerning this family is available for apple (Malus × domestica L. Borkh) due to the limited information on whole genome sequences. In this study, 688 RING domains in 663 predicted proteins were identified in apple. Based on the spacing between metal ligands or substitutions at one or more of the metal ligand positions, nine RING types were identified: RING-H2, RING-HC, RING-C2, RING-v, RING-D, RING-S/T, RING-G, RING-mH2, and RING-mHC, in which the first seven types were described previously in Arabidopsis, while the latter two were newly identified in apple. Proteins containing RING finger motifs were further classified into 57 groups according to the different known or unknown domains outside the RING domains. A total of 643 retrieved proteins appear to be distributed over all 17 linkage groups with different densities. Microarray and expressed sequence tag data revealed that only a few of these RING finger proteins may be involved in fruit development. As a first step towards genome-wide analyses of the RING-containing genes in apple, our results provide valuable information for understanding the classification and putative functions of the RING finger gene family in higher plants.
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