Evidence map›Paper›PMID 21629689›Full record

ArticlePloS one2011

cDNA sequence and Fab crystal structure of HL4E10, a hamster IgG lambda light chain antibody stimulatory for γδ T cells.

Petra Verdino, Deborah A Witherden, Katie Podshivalova, Stephanie E Rieder, Wendy L Havran, Ian A Wilson

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Petra VerdinoDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, California, United States of America.
Deborah A Witherden
Katie Podshivalova
Stephanie E Rieder
Wendy L Havran
Ian A Wilson
Scripps Research Institute · US

Funding

Structural Basis of T Cell Receptor RecognitionR37AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2003 to 2012
$5.8M
JAML: A New Costimulatory Molecule for Gamma Delta T CellsR01AI064811 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI HAVRAN, WENDY L. · 2006 to 2016
$4.8M
STRUCTURAL IMMUNOLOGY OF MOUSE MHC CLASS IR01CA058896 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1994 to 2010
$3.9M
Structural basis of TLR and NLR recognition and signalingR01AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1998 to 2017
$3.7M
NCI NIH HHS CA58896NCI NIH HHS R01 CA058896NIAID NIH HHS AI042266NIAID NIH HHS AI064811NIAID NIH HHS R01 AI042266NIAID NIH HHS R01 AI064811NIAID NIH HHS R37 AI042266
6 · The paper itself

Abstract

Hamsters are widely used to generate monoclonal antibodies against mouse, rat, and human antigens, but sequence and structural information for hamster immunoglobulins is sparse. To our knowledge, only three hamster IgG sequences have been published, all of which use kappa light chains, and no three-dimensional structure of a hamster antibody has been reported. We generated antibody HL4E10 as a probe to identify novel costimulatory molecules on the surface of γδ T cells which lack the traditional αβ T cell co-receptors CD4, CD8, and the costimulatory molecule CD28. HL4E10 binding to γδ T cell, surface-expressed, Junctional Adhesion Molecule-Like (JAML) protein leads to potent costimulation via activation of MAP kinase pathways and cytokine production, resulting in cell proliferation. The cDNA sequence of HL4E10 is the first example of a hamster lambda light chain and only the second known complete hamster heavy chain sequence. The crystal structure of the HL4E10 Fab at 2.95 Å resolution reveals a rigid combining site with pockets faceted by solvent-exposed tyrosine residues, which are structurally optimized for JAML binding. The characterization of HL4E10 thus comprises a valuable addition to the spartan database of hamster immunoglobulin genes and structures. As the HL4E10 antibody is uniquely costimulatory for γδ T cells, humanized versions thereof may be of clinical relevance in treating γδ T cell dysfunction-associated diseases, such as chronic non-healing wounds and cancer.

Indexed as

AnimalsCricetinaeDNA, ComplementaryHumansImmunoglobulin kappa-ChainsImmunoglobulin lambda-ChainsMiceProtein Structure, SecondaryRatsReceptors, Antigen, T-Cell, gamma-deltaT-LymphocytesDNA, ComplementaryImmunoglobulin kappa-ChainsImmunoglobulin lambda-ChainsReceptors, Antigen, T-Cell, gamma-delta

Identifiers

PMID21629689
PMCPMC3101210
OpenAlexW2059887138

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.