Evidence map›Paper›PMID 21625849›Full record

ArticleMolecular biology reports2012

Genome-wide analysis of the heat shock transcription factors in Populus trichocarpa and Medicago truncatula.

Fangming Wang, Qing Dong, Haiyang Jiang, Suwen Zhu, Beijiu Chen, Yan Xiang

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 93 citations in OpenAlex.

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  7. General Analysis of Heat Shock Factors in theInternational journal of molecular sciences · 2024
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  10. Exploring the Heat Shock Transcription Factor (Plants (Basel, Switzerland) · 2023
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  15. Article
  16. Genome-Wide Identification of PetuniaInternational journal of molecular sciences · 2022
    Article
  17. Article
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Fangming WangSchool of Forest and Gardening, Anhui Agriculture University, Hefei 230036, China.
Qing Dong
Haiyang Jiang
Suwen Zhu
Beijiu Chen
Yan Xiang
Anhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Research has provided substantial evidences that heat shock proteins (HSPs) play essential roles in extreme physiological conditions. Heat shock transcription factors (HSFs) are important HSPs regulators, but their functions are poorly understood, particularly in Populus and Medicago. In this study, a comprehensive bioinformatics analysis of the HSFs was performed in Populus trichocarpa and Medicago truncatula. Twenty-eight Populus HSFs and 16 Medicago HSFs were identified, and comparative analyzes of the two plants were carried out subsequently. HSFs were divided into three different classes and they were diverse and complicated transcription factors. The results of semi-quantitative RT-PCR in Populus suggested six genes (PtHSF-03, PtHSF-13, PtHSF-15, PtHSF-21, PtHSF-22 and PtHSF-23) were markedly increased by heat stress. The results presented here provide an important clue for cloning, expression and functional studies of the HSFs in Populus and Medicago.

Indexed as

PhylogenyChromosome MappingCluster AnalysisComputational BiologyConserved SequenceDNA-Binding ProteinsHeat Shock Transcription FactorsMedicago truncatulaPopulusProtein Structure, TertiaryReal-Time Polymerase Chain ReactionSpecies SpecificityTranscription FactorsDNA-Binding ProteinsHeat Shock Transcription FactorsTranscription Factors

Identifiers

PMID21625849
OpenAlexW2073158484

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.